Pairwise Alignments

Query, 768 a.a., MMPL family transporter from Rahnella sp. WP5

Subject, 841 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  342 bits (878), Expect = 4e-98
 Identities = 269/831 (32%), Positives = 433/831 (52%), Gaps = 87/831 (10%)

Query: 5   LHRKLAQSWLLIIVLLVAALFWLLPRSQ-----INSSVLALLPQQQETDIPQAFSDGFTQ 59
           L R  A + L+I ++L+AA+  L  ++      + S +LA+LP+ QE  + Q   D   Q
Sbjct: 9   LSRLSANTRLVIWLVLLAAMALLAAQALSRGAGVQSDILAMLPKIQEDPLTQRAIDRVEQ 68

Query: 60  RL-DRQLMWLVSPPPGAGIQPAAEWLKHLQALPE-LSQVQGPMDAQRQQEWGTFFFKHRN 117
           +L +R  + +VSP     I+ A + L  LQ  PE  +QVQ   D Q  Q    F+F +R 
Sbjct: 69  QLANRIYLGVVSPDQATAIKGAKQLLSALQGAPEAFTQVQSA-DMQGAQALNRFYFPYRF 127

Query: 118 ALLDDATRQRLTAGAESQSQW-ILGQIYSAFAGVSGKELANDPLLLVRA--SQMAQQQSS 174
            LL    +  L  G  ++ +   L Q+Y+AF   + + L+ DPLLL      Q++ Q+  
Sbjct: 128 HLLTTQQKALLATGQLAKLEANTLAQLYNAFGYANSQLLSQDPLLLYPELLKQLSPQRRL 187

Query: 175 G-------GMTLDQGWLMVRDKKGRSWYMVHGELKASSYDITSAKQTVA----ALGAVKE 223
                   G  L Q     +D +G S  +V  +   S+++  + +  +A    A+  +++
Sbjct: 188 KVVDGILVGQELAQEARSNKDTQGNSVAIVMAQGVGSAFNPKAQELQLARLEEAISQMQQ 247

Query: 224 AFEARWPGAKVLERGTIFYSNYASQQAEHDLSTIGAASVTGVFVLILLMFRSVLPMLLSL 283
           + E +     V++ G +F++  A+ QA+ ++S++G AS+ GV +L+ L FRS++P+ ++ 
Sbjct: 248 SLEPKQE-VTVIKGGALFHAAAATTQAKREVSSLGLASLIGVILLVWLAFRSMMPLTIAA 306

Query: 284 LSIAIGALSGTVFTLWVFGEIHVMTLVLSTSIVGISADYTLYFLTER-----RVHGDSS- 337
           L+IA   L     TLW+F ++H++TLV  TS++GI+ DY+ +F  ER      V G ++ 
Sbjct: 307 LTIATSLLFALSATLWIFTQVHLLTLVFGTSLIGIAIDYSFHFYCERLQSQKAVSGTATQ 366

Query: 338 ----TPLESLKKLFPALSVALLTTVVAYLMLLIAPFPGLRQLAVFAAAGLSAACITVMCW 393
               T  +++ ++FPA S+ALLTTV+AYL + + PFPG++Q+AVF AAGL  A +T++  
Sbjct: 367 TTGITATDAVARVFPAASLALLTTVIAYLAIGLTPFPGMQQVAVFCAAGLLGAYLTLIFA 426

Query: 394 YPYLSRRLPTGPAPGLTLIMRWLLAWRS-----RKAVRIGLPLLILVLVVAGISRLKIND 448
           YP L+          L L  R+L A ++       A  I + L +L++ + G++RL +ND
Sbjct: 427 YPKLANSTMRPGDRALGLATRYLNAMQTIARPINGAKGIAIALGLLLVAIFGLNRLGVND 486

Query: 449 DIADLQSLPAGLQLQEQQIAALTGQTNDQKWLVVYGDSAEQTLQRLEALRPKLAQAKEKG 508
           DI  LQ  P  +   EQ++  +     D ++++V  ++AE  L RLEAL P L   + +G
Sbjct: 487 DIRALQQSPLSVTQGEQRLRQVMSGGTDNQFILVRAETAEALLTRLEALSPTLGSLQHQG 546

Query: 509 VIDGF--RAITLPSQAQQQRDLSLLRQ---HAPQIIAQLQQAGIPVAKPDLSA------- 556
           V+      A  LPSQA QQ    L  Q     P+++A L   G     P L A       
Sbjct: 547 VLGNSVNLAHYLPSQASQQEAYRLQGQIYHKLPEVLAHLGLDG--DLAPSLMASFEASAN 604

Query: 557 QTVDVPEWRNSVVSEGWRLLWLSLPDGRSA-----------------------------A 587
           +T+   ++  S   E +  LWL+ PDG  A                             A
Sbjct: 605 ETITPDKFFASRAGELFAPLWLA-PDGTDAQAQMQAQTQAQAKTQPSDKTSGSDGATYGA 663

Query: 588 LIPVNGVHDSAAMAALAASMPGTGWIDRKTEFSELFSQYRVYLTWLLALAVAVIAVTYLW 647
           ++ + G+ D   +    + + G   +D+  + S++ ++YR     LL LA+ V  + +  
Sbjct: 664 IVLLGGITDLDDLTQAISPLSGVTLVDKVQDISDVMAKYRSLTLSLLGLALVVAGLIFSL 723

Query: 648 RFRLPHGL-VCLVPTLLSLGMGVAALGFSGHNLNLFSLLALILVLGIGINYTLFFT-NPR 705
           RF L   L +  VP L +L + +A LG +G  L LF  LALILV GIG++Y+LFF  + R
Sbjct: 724 RFGLKMALWITAVPALAAL-LTLAGLGLAGSPLTLFHALALILVFGIGVDYSLFFAESHR 782

Query: 706 GTPTTSMFAIFMAAVTTLLTFGMLVFSSTQAISSFGIVLSFGILTAFLLSP 756
           G     M A+FM+A +TL+ FG+L FS T AI  FG+ L  GI   F+LSP
Sbjct: 783 GEGV--MMAVFMSACSTLMAFGLLAFSQTPAIHYFGLTLLLGIGLTFVLSP 831