Pairwise Alignments

Query, 768 a.a., MMPL family transporter from Rahnella sp. WP5

Subject, 834 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  336 bits (862), Expect = 3e-96
 Identities = 255/799 (31%), Positives = 413/799 (51%), Gaps = 55/799 (6%)

Query: 13  WLLII--VLLVAALFWLLPR----SQINSSVLALLPQ-QQETDIPQAFSDGFTQRLDRQL 65
           W L I   L++AA  W L      +++ S +LA+LP  QQ+T   +A     +   D+  
Sbjct: 20  WRLAIWLSLMLAASLWTLQLWHNGAKVQSDILAMLPHLQQDTLTARALEQVESTLADQVY 79

Query: 66  MWLVSPPPGAGIQPAAEWLKHLQALPELSQVQGPMDAQRQQEWGTFFFKHRNALLDDATR 125
           + L++      I  A   ++ L+A           D Q  +  G ++F HR  LL     
Sbjct: 80  LALIAKDETQAIAAATLLIEQLEAQNGAFTDIRSADMQMGEALGQYYFPHRFKLLTSEQT 139

Query: 126 QRLTA-GAESQSQWILGQIYSAFAGVSGKELANDPLLLVRASQMAQQQSSGGMTLDQGWL 184
             LT  G +S       Q+YSAF+  + + L  DPLLL  A+ +A   SS  ++  QG L
Sbjct: 140 DALTHNGLDSLVASATTQLYSAFSYANSQLLTQDPLLLFPANLLALAPSSK-LSAKQGIL 198

Query: 185 MVRDKKGRS-----WYMVHGELKASSYDITSAKQTVAALGAVKEAFEARWPGAKVLERGT 239
           +    +G         +V  + K S+++  +     AAL     A   ++ G +VL+ G 
Sbjct: 199 LAHPNQGVDNSEGVAAIVMAKGKDSAFNPNAQLIQQAALTQALTAVTEQYAGIQVLQAGA 258

Query: 240 IFYSNYASQQAEHDLSTIGAASVTGVFVLILLMFRSVLPMLLSLLSIAIGALSGTVFTLW 299
           +F++  A+  A+ ++S +G AS+ GV +L+ L FRSV+P+LL++++I+ G L    FTL 
Sbjct: 259 LFHAIEATNTAKSEISILGLASLLGVVLLVWLAFRSVMPLLLAIVTISSGLLLAVTFTLS 318

Query: 300 VFGEIHVMTLVLSTSIVGISADYTLYFLTERRVHGDSSTPLESLKKLFPALSVALLTTVV 359
           VFGE+H++TLV  TS++GI+ DY+ +F  E R++    +   ++  +FP +S+A +T+ +
Sbjct: 319 VFGELHLLTLVFGTSLIGIAIDYSFHFYCE-RLNEQHHSAQATVAYIFPTVSLAFITSAL 377

Query: 360 AYLMLLIAPFPGLRQLAVFAAAGLSAACITVMCWYPYLS-RRLPTGPAPGLTLIMRWL-- 416
           AY+ + +APFPG++Q+A+F A+GL  A +T++  YP L+  +LP+G  P L L   +L  
Sbjct: 378 AYVGIGLAPFPGMQQVAIFCASGLLGAYLTLVLAYPLLAGSKLPSGEQP-LNLAQAYLAR 436

Query: 417 LAWRSRKAVR-IGLPLLILVLV---VAGISRLKINDDIADLQSLPAGLQLQEQQIAALTG 472
           +A  S K V   GL L  L+L    + GIS+LK++DDI  LQ  P  +   E ++  L  
Sbjct: 437 MAQFSNKLVSPWGLSLFTLILAGVCLLGISQLKVDDDIRHLQQSPVSVTEPEDKLRKLLS 496

Query: 473 QTNDQKWLVVYGDSAEQTLQRLEALRPKLAQAKEKGVIDGFRAITLPSQAQQQRDLSLLR 532
              D ++L+V   S E  LQ+LE+L P+L  A ++  +  + +++    ++Q++D +   
Sbjct: 497 GGTDNQFLLVRAPSEEALLQKLESLGPQLDIAIKQQELGNYVSLSSYLPSKQKQDAAYRL 556

Query: 533 Q---HAPQIIAQLQQAGIPVA-KPDLSA-------QTVDVPEWRNSVVSEGWRLLWLS-- 579
           Q   +  Q+ A L   G+  +  P LS          +   ++    + +    LWL+  
Sbjct: 557 QGEIYQSQLSAVLSSIGLDDSLAPSLSVAYLAAKDSYITPTDFFELGLGKQLAPLWLAPL 616

Query: 580 -------------------LPDGRSAALIPVNGVHDSAAMAALAASMPGTGWIDRKTEFS 620
                              L      A++ + G+ D AA+ A  A  P    +D+  + S
Sbjct: 617 GLAPLEHSTDPTASADNTKLGSDSHGAIVLLGGIEDIAALKARFAKDPQVQLVDKVADIS 676

Query: 621 ELFSQYRVYLTWLLALAVAVIAVTYLWRFRLPHGLVCLVPTLLSLGMGVAALGFSGHNLN 680
            L   YR+    LL LA+ +  + +   F L    V +    L+  + +A LG  G  L+
Sbjct: 677 TLMGHYRLLTLKLLGLALVIALLLFSLSFGLKKATVVVAVPALAAVLTLAILGLVGSPLS 736

Query: 681 LFSLLALILVLGIGINYTLFFTNPRGTPTTSMFAIFMAAVTTLLTFGMLVFSSTQAISSF 740
           LF  LALIL+ GIGI+Y+LFF +        M A+FM+A +TLL FG+L FS TQAI  F
Sbjct: 737 LFHALALILIFGIGIDYSLFFASVEQHGKAVMMAVFMSACSTLLAFGLLAFSQTQAIHYF 796

Query: 741 GIVLSFGILTAFLLSPLTL 759
           G+ LS GI   F+LSPL L
Sbjct: 797 GLTLSLGIGFTFVLSPLIL 815