Pairwise Alignments

Query, 1152 a.a., exodeoxyribonuclease V subunit gamma from Rahnella sp. WP5

Subject, 1208 a.a., exodeoxyribonuclease V, gamma subunit from Marinobacter adhaerens HP15

 Score =  986 bits (2549), Expect = 0.0
 Identities = 530/1114 (47%), Positives = 694/1114 (62%), Gaps = 48/1114 (4%)

Query: 4    GLMVLHGNHSETLRDVLVSWMAAHPLSPLENEVILVQSNGINQWLKLALAR----DVTDG 59
            G   +H NH E LR  +V     +P+ PLE+E  LVQSNGI QWLKLALA     D  +G
Sbjct: 18   GFHAIHANHLEDLRRAVVYICRHNPMPPLESETFLVQSNGIAQWLKLALAEKRTEDGLEG 77

Query: 60   GCGIAAALDIKLPARFFWQVYRAVLGKEQVPESSPFDRPLLTWRLIRLLPELLAEP-VFA 118
            G GIAA +D   PARF WQ YRAVL   +VPE SPFD+  L WRL RLLP L+ +   F 
Sbjct: 78   GLGIAAGMDFLFPARFIWQAYRAVLPDGEVPEQSPFDKRRLVWRLYRLLPRLVGQDEAFT 137

Query: 119  PLARFLK-DDGDMRKLHQLAQRLADLFDQYQVYRADWLEDWGNGLDVLRTSRKGSEPLPE 177
            PLARFL+ +D D+R   QLA+++ADLFDQYQV+RADWL  W  G DV+ T+R   +PL  
Sbjct: 138  PLARFLEGNDPDLRNF-QLAEKVADLFDQYQVFRADWLAAWEQGKDVIITARAEEKPLDA 196

Query: 178  NLLWQPQLWRALLADVPENERNTSRAALHQRFLHYAQTIPEDQRPAGLPARLVVFGISSL 237
               WQP LWR L+ DV   + +TSR+ +H RF+   Q +     P+ LP R+VVFG+SSL
Sbjct: 197  ETRWQPLLWRRLVEDVGA-DAHTSRSQIHTRFMEQGQRLQAPANPSRLPTRIVVFGVSSL 255

Query: 238  PQQSLEVLAVLGRWTHIFMCVHNPCEHDWSDIIADKDLLRAERIRQLRKPGMPQVIAEDE 297
            P+Q+LE L VL R++ + +CVHNPC+  W+DII+D++LL AER R    P +  +   D+
Sbjct: 256  PRQALEALYVLSRFSQVVLCVHNPCQFYWADIISDRELLTAERKRGRTHPTLSAIEDPDQ 315

Query: 298  LHQHAHPLLAAWGKQGRDYIGLLNEYDNHESYAAQLAPVIPRIDLFTSNGTDT---LLHQ 354
            LHQHA+PLLAAWGKQGRDYI LL+E+DN + Y         +ID+F+ +G      LLHQ
Sbjct: 316  LHQHANPLLAAWGKQGRDYIRLLDEFDNPDQYRGSFQTPDQKIDIFSDHGNPEAPRLLHQ 375

Query: 355  LQEDILQLRPLAETIDEWPAADVQHDDSLRFFITHSAQREVEVLHDRLLAALAADPTLKA 414
            LQ DI  L PL E   +    DVQ D SL F   HS QREVE+LHD+LLAA   DPTL+ 
Sbjct: 376  LQNDIHNLTPLREIRQQQRQLDVQQDHSLAFHQAHSPQREVEILHDQLLAAFNVDPTLRP 435

Query: 415  RDIIVMVPDINGYAPHIQAVFGLMERSDPRYIPFTVADQGPRQNNPLLGALESLLELPQS 474
            RD+IVMVPDIN YAPHIQAVFG  +    R+IPFT++DQG R + P+L ALE+L+ LP+S
Sbjct: 436  RDVIVMVPDINVYAPHIQAVFGRYQPGRKRHIPFTISDQGQRHHEPVLIALETLMSLPRS 495

Query: 475  RFAVSDLLDLLDVPSVRQRFGIEEEQLPLLHRWIRAANVRWGLHAEQRQSLELPLSPEQN 534
            RFAVS+++ LL+VP +R RFGI E+++PL  RW+  AN+RWGLH + R+SL+LP   E+N
Sbjct: 496  RFAVSEIISLLEVPGIRDRFGINEDEIPLARRWVEGANIRWGLHGQHRESLDLPAELERN 555

Query: 535  SWFFGLQRMLLGYAVGSGEAWKNIEPLDEIGGLDAALIGPLSHLLNCLDDTWRQLREPAP 594
            +W  GL+ MLLGY +G  E W  +EP  EIGGL A+L G L+  ++ L+  W+ L+    
Sbjct: 556  TWQSGLRSMLLGYGMGDDEPWAGVEPFGEIGGLQASLAGRLNDFVHQLETLWQALQTHRT 615

Query: 595  PQEWGRRLRHILSQYFSEDDGEDGFILVRLHGELEIWLEACESVDLQAE-LPLSVVRDHW 653
            P EW      +L Q+F + +G D  +L R   +LE WLE   +  L+ + LPL++V+D  
Sbjct: 616  PDEWEHLFSEMLGQFFHKVEGSDLLLLNRFRRQLEQWLEDALAAGLEEQTLPLNIVKDVL 675

Query: 654  LAQFDQSGLTQPFFGGAVTFATLMPMRAIPFRHVHLLGMNDGDYPRNRVPMDFDLMGRDY 713
            L   D+ GL Q F  G V FATLMPMRAIPFR V LLGMNDGDYPR+R P+DFDLM +DY
Sbjct: 676  LEGLDEGGLNQRFLAGKVNFATLMPMRAIPFRKVCLLGMNDGDYPRSRPPVDFDLMAQDY 735

Query: 714  RPGDRSRREDDRYLFLEALLSARERLHISWVGRSIHDNTERPPSVLVAQLRDHLAAGW-- 771
            RPGDRSRREDDRYLFLEALLSAR +L+ISWVGRSI D++ERPPSVLV QL+DHL + W  
Sbjct: 736  RPGDRSRREDDRYLFLEALLSARAQLYISWVGRSIKDDSERPPSVLVGQLQDHLDSLWSV 795

Query: 772  KAQNGEDLLHALTTEHRLQPFNRDYF------------SQGSP-----------LFSYAH 808
              Q    ++ ALTT+H LQPF+R YF               SP           LF+Y  
Sbjct: 796  SGQPETKVIEALTTQHPLQPFSRSYFPKANGLEEGGKGENSSPRPLAEVLEARRLFTYER 855

Query: 809  EWRAGLEAEAAAVAAQPLQPVEQEGALTLRQLSDFLSDPVRSFFRQRLNIYFELEDPGSE 868
            EWR+    EAAA     L     E  ++L  L+ FL  P+ +F+++RL + FE  +    
Sbjct: 856  EWRSAHGGEAAAQTQSALPYQAPEEPISLNDLAAFLKKPIDTFYQRRLQVRFEDVEDDDT 915

Query: 869  DQEPFDINALENWRLQDELIRAQKWALEAGVSRQDVLRQQLERIERRGELAPGEFAAVLS 928
            D E F+++ L+ WRL +ELI+       +     D L+  L+R+ RRG+L  G     L 
Sbjct: 916  DNENFELDGLDRWRLDNELIQDGLLKASSDEELHDRLQATLDRMARRGDLGMGVTEHRLR 975

Query: 929  DDLAEPMDTLFASYQQVLDAWPQPLA-----NEAVEDKTGGVTFSDWLSELRANAAGGRA 983
             +LA  +  LF  YQ  L  WP+ +A     +   E   G V  +D +  LR NA G   
Sbjct: 976  SELAGRLPDLFERYQNALADWPEAVAEPLPFDYRFESALGSVEIADLIDNLRCNAQGELC 1035

Query: 984  RVVLES----TGIIKDRAYRFDRLLPYWVAHLAGHLDGQPMHTFIVSKNGTAE--LPPLE 1037
            R+V+ S    TG    +  R+  L+  W+ HLAG L GQP  T ++ K    +    PL 
Sbjct: 1036 RLVVASSSLLTGSGSSKKVRYANLMRDWLIHLAGQLGGQPFETLVLGKEEGRKFRFAPLH 1095

Query: 1038 IAYARELWDTLIETWKIGQLRPLPLAVKTAFVWL 1071
               AR L++T++  W     R LP+  +  F W+
Sbjct: 1096 PERARPLFETVLSGWMDATTRALPIHCEAGFAWI 1129