Pairwise Alignments

Query, 684 a.a., exodeoxyribonuclease V subunit alpha from Rahnella sp. WP5

Subject, 1539 a.a., TraA1 conjugal transfer protein from Sinorhizobium meliloti 1021

 Score = 47.8 bits (112), Expect = 4e-09
 Identities = 51/165 (30%), Positives = 72/165 (43%), Gaps = 42/165 (25%)

Query: 192 SAFSIITGGPGTGKTTTVVRLLALLQTLALEENGQPLRIRLAAPTGKAAARLNESIAGAV 251
           +A + + G  G GK+T       LL        G+  R+  AA  GKAA  L +S +G  
Sbjct: 406 NAIAAVVGLAGAGKST-------LLAAARAAWEGEGRRVIGAALAGKAAEGLEDS-SGIR 457

Query: 252 SKLDLS---ALGNGNAVRESINTDVVTLHRLLGSRPDTRHFRHHPGNPLMLDVLVVDEAS 308
           S+   S   A  NG   RE +N                             DVLV+DEA 
Sbjct: 458 SRTLASWELAWENG---REQLNRG---------------------------DVLVIDEAG 487

Query: 309 MVDLEMMAALLAALPEQ-ARLILLGDKDQLASVEAGALLSELCQR 352
           MV  + MA +L A+ +  A+ +L+GD  QL  +EAGA    + +R
Sbjct: 488 MVSSQQMARVLKAVEDAGAKAVLVGDAMQLQPIEAGAAFRAISER 532



 Score = 28.5 bits (62), Expect = 0.003
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)

Query: 607 VETVFAMTVHKSQGSEFTHTALLLPENLSPILTRELIYTGITRAR 651
           V+  +A T+HKSQGS    T +L     + ++ + L Y  +TR R
Sbjct: 725 VDHGYAATIHKSQGSTVDRTFVL----ATGMMDQHLTYVAMTRHR 765