Pairwise Alignments

Query, 457 a.a., exodeoxyribonuclease VII large subunit from Rahnella sp. WP5

Subject, 537 a.a., Exodeoxyribonuclease VII (NCBI) from Rhodospirillum rubrum S1H

 Score =  236 bits (603), Expect = 1e-66
 Identities = 162/490 (33%), Positives = 237/490 (48%), Gaps = 52/490 (10%)

Query: 4   PSSP----PIFTVSRLNQTVRQLLENEMGQVWLSGEISNFSQPSSGHWYFTLKDDRAQVK 59
           P++P    P  +VS L+  +++ +E    +V + GEIS      SGH Y  LKDD+A + 
Sbjct: 5   PNAPVHNLPELSVSELSGALKRTIEEAFSRVRVRGEISQPKVAGSGHCYLRLKDDQAVID 64

Query: 60  CAMFRNTSRRTTFRPQNGQQVLVRATITLYEPRGDYQLIAESMQEAGDGLLQQKFDLLKQ 119
             ++R T  +   RP+ G +V+    +T Y  R  YQ++ ES++ AG+G L +  +  ++
Sbjct: 65  AIIWRGTMAKLALRPEEGLEVIAIGRLTTYPGRSSYQIVIESLELAGEGALLKMLEERRR 124

Query: 120 QLAAEGLFDAQFKQPLPSPAKCVGVITSASGAALHDVLNVLKRRDPSLPVIIYPTSVQGA 179
           +LAAEGLFDA  K+  P     +GVITS +GA + D+L+ L  R P  PV+++P +VQG 
Sbjct: 125 RLAAEGLFDAGRKRRPPFLPSVIGVITSPTGAVIRDILHRLADRFPR-PVLVWPVAVQGE 183

Query: 180 DAPGQIVRAIELANAR------EEVDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIV 233
            A  QI  AI   NA          DVLIV RGGGSLEDL +FNDE V RA  AS IP++
Sbjct: 184 GAAAQIAAAITGFNALPAGGPVPRPDVLIVARGGGSLEDLMAFNDEAVVRAASASAIPLI 243

Query: 234 SAVGHETDVTIADFVADLRAPTPSAAAELISRNQLELLRQIQSQQQRLEMA--------- 284
           SAVGHETD T+ D  ADLRAPTP+ AAE+    +L+LL Q++ +  RL+ A         
Sbjct: 244 SAVGHETDTTLIDHAADLRAPTPTGAAEMAVPVRLDLLAQVRERGGRLDGATLRLIEERR 303

Query: 285 ------------MDYYLAQLTQRFTRLNHRLQQQHPHL--------------------RL 312
                       +   +    QR      RL+   P L                     +
Sbjct: 304 LRIEGLGRGLPDLARLIGTFAQRLDDRAERLEAALPRLLDRRADGVFHTAARLRGPGEMI 363

Query: 313 ARQQTTLFKLRRRLDEAMQNQLRQMLRRTDRLQQRLTQQQPQPRIHRAQQRVQQLQYRLQ 372
           AR+   L +  R L+  +   LR+   R D+   RL   Q    +    + +  L  RL 
Sbjct: 364 ARKADALERAGRGLETGLARGLREAASRLDQRADRLRPGQIARLVAEGSRALTTLAGRLD 423

Query: 373 QAMSSQLTESRQRFGTACTQLEGVSPLATLARGYSVTTTPQGALLKKTTQTAPGDTLKTR 432
                 L   +        +L+ +S    L RGY+V     GA++        GD +   
Sbjct: 424 DLGRQTLVRRQDTLEGLGARLDNMSYRKVLERGYAVVRDATGAIVPAARGLTKGDGVVLD 483

Query: 433 LADGWIESEV 442
             DG + + +
Sbjct: 484 FRDGRVAATI 493