Pairwise Alignments

Query, 228 a.a., ABC transporter permease subunit from Rahnella sp. WP5

Subject, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  167 bits (423), Expect = 2e-46
 Identities = 86/221 (38%), Positives = 142/221 (64%), Gaps = 4/221 (1%)

Query: 1   MLYGYSQVIIQGTLVTLELAISSVILALVIGLIGAGGKLSKNRIVSGFFGCYTTLIRGVP 60
           +L GYS  ++Q + +TL++A++S+++ L++ L+ AGG+++K +++        T+IRG+P
Sbjct: 2   VLTGYSLSLVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLP 61

Query: 61  DLVLMLLIFYGLQIALNSVTESLGLTQIDIDPMSAGIITLGFIYGAYFTETFRGAFMAVP 120
           +L+++L I++G    L  +T       I+I P  +G+I L  I+ +Y ++T RGA  AV 
Sbjct: 62  ELLVVLFIYFGSTQVLFFITGEF----IEISPFISGVIALSLIFASYASQTLRGALKAVG 117

Query: 121 RGQIEAATAFGFSGSQIFRRILFPAMMRFALPGIANNWQVILKATALVSLLGLNDVVKAT 180
           RGQ EAA+A G   S  F RI+ P  +R ALPG+ N W V+LK TALVSL+G+ D++K  
Sbjct: 118 RGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQA 177

Query: 181 QLAGKGTYQPFYFAIVAGVVYLVFTTLSNGVLVWLDRRYSL 221
           QL    T++ F +   A VVYLV T ++  V+  +D ++S+
Sbjct: 178 QLTSAATHEAFTWYATAAVVYLVITLITQRVVKVIDNKFSI 218