Pairwise Alignments

Query, 237 a.a., ABC transporter permease from Rahnella sp. WP5

Subject, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  199 bits (507), Expect = 3e-56
 Identities = 105/216 (48%), Positives = 144/216 (66%), Gaps = 5/216 (2%)

Query: 21  TGLAITLWLLISSVVIGGLLAVPMAVGRVSSNKFLRYPIWLYTYIFRGTPLYVQLLVFYS 80
           +GL  T+WL+  S+VIG L A+P+A+ R S  K+   P W Y Y  RGTPL VQL + Y 
Sbjct: 15  SGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLYLIYY 74

Query: 81  GMYSLEIVRGTDFLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRAVPHGEIEAANAYG 140
           GM     V+ T + +A+F     C ++A  LNT AYT EI  GAI  +P GE+EAA AYG
Sbjct: 75  GMDQWFPVKDTLWEHAWF-----CALVAFILNTSAYTAEIIRGAINGLPKGEVEAAKAYG 129

Query: 141 FSRFKLYTCIILPSALRTALPAYSNEVILMLHSTALAFTATVPDVLKIARDINSATYQPF 200
            SRF+ Y  IILPSALR +LPAYSNEVI MLH +A+A   T+ D+   AR +NS  Y PF
Sbjct: 130 MSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYYAPF 189

Query: 201 YAFGIAAVIYLCVSFVLIGLFRKAEKRWLAHVKPQA 236
            AF  A + Y+ ++F+++  F++AE+R+LA++KP++
Sbjct: 190 EAFLSAGLFYMALTFIILWCFKQAEQRFLAYLKPRS 225