Pairwise Alignments

Query, 557 a.a., 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase from Rahnella sp. WP5

Subject, 554 a.a., Probable bifunctional menaquinone biosynthesis protein MenD : 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (SHCHC synthase) + 2-oxoglutarate decarboxylase (alpha-ketoglutarate decarboxylase) (KDC) from Mycobacterium tuberculosis H37Rv

 Score =  134 bits (338), Expect = 7e-36
 Identities = 155/505 (30%), Positives = 216/505 (42%), Gaps = 70/505 (13%)

Query: 11  ATLILEALTRHQVQHVCIAPGSRSTPLTLA---AAAHPHLICHTHFDERGLGHLALGLAK 67
           A ++++ L R  V+ V + PGSR+ PL  A   A     +  H   DER  G+LA+GLA 
Sbjct: 8   ARVVVDELIRGGVRDVVLCPGSRNAPLAFALQDADRSGRIRLHVRIDERTAGYLAIGLAI 67

Query: 68  ASGQRVAIIVTSGTAVANLYPALIEAGLTGEKLVLLTADRPPELIDCGANQAIRQTGMFA 127
            +G  V + +TSGTAVANL PA++EA      L++L+A+RP EL+  GANQ + Q G F 
Sbjct: 68  GAGAPVCVAMTSGTAVANLGPAVVEANYARVPLIVLSANRPYELLGTGANQTMEQLGYFG 127

Query: 128 SHPVGTL------DLPRPAPEISARWLVSALDNTLAQQT------HGAVHINCPFAEPLY 175
           +    ++      D P     ++A W  SA    LA  T       G VH + P  EPL 
Sbjct: 128 TQVRASISLGLAEDAPERTSALNATWR-SATCRVLAAATGARTANAGPVHFDIPLREPLV 186

Query: 176 --GEDNGEHQDWLLALGDWWQGHQPWLSYSQVLPAIAQPDWFSWRQKRGVIIAGRLSACE 233
              E  G         G  W  + P +++ Q L      D         V+I+G  +   
Sbjct: 187 PDPEPLGAVTPPGRPAGKPWT-YTPPVTFDQPLDIDLSVD--------TVVISGHGAGVH 237

Query: 234 SEQVAQWAAQLGWPLISDVQA--STGNPLPCADLWLASPQAQAILAHVQLVIQFGGGLTG 291
               A        P +++  A  S  NPL    L L  PQ   +L    L       L  
Sbjct: 238 PNLAA-------LPTVAEPTAPRSGDNPLHPLALPLLRPQQVIMLGRPTLHRPVSVLLAD 290

Query: 292 KRLLQWQATCQPDEYWLVDPLSGRQDPAQHRGRRLQARVSEWLQAHPAQPQPDWAEALEH 351
             +  +  T  P   W    +SG    +Q  G R               P+P W +    
Sbjct: 291 AEVPVFALTTGP--RW--PDVSGN---SQATGTR---------AVTTGAPRPAWLDRCAA 334

Query: 352 CSQRALHAVEIRLDG---VFGEAAAAWQLPALLPEHGQLFLGNSLIVRLVDAFAQLPAGY 408
            ++ A+ AV  +L       G   AA    AL P   QL LG S  VR V        G 
Sbjct: 335 MNRHAIAAVREQLAAHPLTTGLHVAAAVSHALRP-GDQLVLGASNPVRDVALAGLDTRGI 393

Query: 409 PVFANRGASGIDGLLSTAAGVQRA-------TCKP-----TLVLLGDISALYDLNALALM 456
            V +NRG +GIDG +STA G   A       T  P     T+ L+GD++ ++D + L + 
Sbjct: 394 RVRSNRGVAGIDGTVSTAIGAALAYEGAHERTGSPDSPPRTIALIGDLTFVHDSSGLLIG 453

Query: 457 RQCSAP--TVIIVVNNNGGQIFSLL 479
                P    I+V N+NGG IF LL
Sbjct: 454 PTEPIPRSLTIVVSNDNGGGIFELL 478