Pairwise Alignments

Query, 587 a.a., DEAD/DEAH box helicase from Rahnella sp. WP5

Subject, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

 Score = 84.7 bits (208), Expect = 2e-20
 Identities = 90/344 (26%), Positives = 157/344 (45%), Gaps = 31/344 (9%)

Query: 29  VIVLPTGAGKSLVIA-ELARVARGRVLVLAHVKELVAQNHSKYLSYGLEADIFAAGLNLK 87
           ++VL TG GK+ + A +  +    +VL +AH +E++ Q    +      A         +
Sbjct: 241 LVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ 300

Query: 88  QSSGKVIFGSVQSVAP--NLAEFSGE-FSLLIVDECHRISDDDNSQYQQIIGHLKAQNPR 144
            +   ++F SV ++    +L  F+ + F  ++VDE H  +      Y+ ++ + K   P+
Sbjct: 301 NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAA---RSYRNLLTYFK---PK 354

Query: 145 LRLLGLTATPYRLGKGWIYQYHHQGIVRGDANSLFRDCIYELPLRYMIKNGFLVPPERLD 204
             LLGLTATP R  +  I       +V            +E  L + I    LVP +   
Sbjct: 355 F-LLGLTATPERSDQADILSLCDSNLV------------FERNLVHGIDEKILVPFDYHG 401

Query: 205 MPVVSYDFSRLQASSNGLFSEADLNDELRQQKRITPHIISQIIEFAQDRKGVMIFASTVE 264
           +   + ++  +    NG F    L++ L  Q+R   H+     +  Q R   + F  + +
Sbjct: 402 IYDQAVNYQEIPWR-NGKFDPDSLDNALATQRR-AEHVYQHWHQKKQTR--TLAFCVSKK 457

Query: 265 HAGEIFGL-LPKGEAALISAQTHAVERDRLITAFKAQQLRYLVNVSVLTTGFDAPHVDLI 323
           HA  +    L KG  A+       V R++ +    + ++  L +V +   G D P +D I
Sbjct: 458 HADFMAEFCLSKGIKAIAVYSDSKVRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTI 517

Query: 324 AILRPTESVSLYQQIVGRGLR--LAPGKTDCLILDYAGNPHDLF 365
            +LRPTES  L+ Q +GRGLR  +   K+  +++D+ GN HD F
Sbjct: 518 LMLRPTESKILFLQQLGRGLRRSIETQKSKLVVIDFIGN-HDSF 560