Pairwise Alignments

Query, 288 a.a., deoxyribonuclease IV from Rahnella sp. WP5

Subject, 252 a.a., Probable endonuclease IV End (endodeoxyribonuclease IV) (apurinase) from Mycobacterium tuberculosis H37Rv

 Score = 85.9 bits (211), Expect = 8e-22
 Identities = 82/275 (29%), Positives = 122/275 (44%), Gaps = 32/275 (11%)

Query: 4   VGAHVSAAGGVDQAVLRAHELE-ATAFALFTKNQRQWKAAPLPEDVIEKFKVACEKYGYQ 62
           +G+HVS         L A E E A    +F  N + WKA P P D     K A       
Sbjct: 3   IGSHVSPTDP-----LAAAEAEGADVVQIFLGNPQSWKA-PKPRDDAAALKAA------- 49

Query: 63  SNQILPHDSYLINLGHPVTEALEKSREAFLDELQRCEQLGLSLLNFHPGSHLMQIEEDKC 122
           +  I  H  YLINL          SR+   +       +G + +  H G     + +D  
Sbjct: 50  TLPIYVHAPYLINLASANNRVRIPSRKILQETCAAAADIGAAAVIVHGG----HVADDND 105

Query: 123 LALISESLNIALDKTKG-VTAVIENTAGQGSNLGFRFEHLAKIIEGVEDKSRVGVCIDTC 181
           +    +    ALD+ +  V   +ENTAG    +  RF+ +A++ + + D   +G C+DTC
Sbjct: 106 IDKGFQRWRKALDRLETEVPVYLENTAGGDHAMARRFDTIARLWDVIGDTG-IGFCLDTC 164

Query: 182 HAFAAGYDLRTAEECEKTFKHFEEVVGFQYLRGMHLNDAKSEFNSRVDRHHSLGEGNIGN 241
           H +AAG  L  A +  K      ++V        H ND++ E  S  DRH +LG G I  
Sbjct: 165 HTWAAGEALTDAVDRIKAITGRIDLV--------HCNDSRDEAGSGRDRHANLGSGQIDP 216

Query: 242 TVFSWIMKDARFDGIPMILETVNPDIWKDEIAWLK 276
            +    +K A   G P+I ET +    KD+IA+L+
Sbjct: 217 DLLVAAVKAA---GAPVICETADQG-RKDDIAFLR 247