Pairwise Alignments

Query, 430 a.a., serine--tRNA ligase from Rahnella sp. WP5

Subject, 431 a.a., seryl-tRNA synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  420 bits (1079), Expect = e-122
 Identities = 225/429 (52%), Positives = 283/429 (65%), Gaps = 13/429 (3%)

Query: 1   MLDPNLLRNELDAVAEKLARRGFKLDV--ETLRSQEERRKVLQVETETLQAERNSRSKSI 58
           M D  L+R   +A    L RR     V  E L     RR+ + +  ET QAE+N+ SK +
Sbjct: 1   MHDIRLIRETPEAFDAALTRRPGVAPVSGEILALDAARREKI-LAAETAQAEQNAASKQV 59

Query: 59  GQAKARGEDIEPLRLEVNTLGEKLDAAKAELDALQNDIRDIASA--IPNMPDDSVPAGKD 116
           G AKA G++ E  RL      +K + A  +  A ++D    A    IPN+P D  P G D
Sbjct: 60  GAAKAAGDEAEFERLRALVGAKKAEVAALKAAAAEDDAALSARLMEIPNLPFDDTPEGAD 119

Query: 117 ENDNQEVSRWGTPRQYDFTVRDHVSLGEMAGGLDFAAAVKLTGARFVVMKGQIARMHRAL 176
           E DN E+ RWGTPR   F  ++H +L  +  G+DF AA KL+G+RFVV+ G +AR+HRAL
Sbjct: 120 EADNVEIKRWGTPRDLGFAPKEHYALPSVVPGMDFEAAAKLSGSRFVVLSGAVARVHRAL 179

Query: 177 SQFMLDLHTEQHGYLETYVPYLVNQETLYGTGQLPKFGEDLFHTKPLDEEAGSSNYALIP 236
           +QFM+D H EQ+G  ET+ P LV +E + GTGQLPKFGED + T+          + L+P
Sbjct: 180 AQFMVDTHVEQNGLTETWTPVLVREEMMLGTGQLPKFGEDSYQTR--------EGWWLVP 231

Query: 237 TAEVPLTNLTRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIV 296
           TAEV LTNL   EI+E  SLP +  AHT CFRSEAGS GRDT G++R HQF+KVEMV + 
Sbjct: 232 TAEVSLTNLVAGEIVEAASLPRRYVAHTQCFRSEAGSAGRDTAGMLRQHQFEKVEMVSVT 291

Query: 297 RPEDSMDALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWLPAQDTYREI 356
           RPEDS   L+ +TG AE +L+ L LPYR ++LCTGDMGFG+ +T+D+EVWLP QD YREI
Sbjct: 292 RPEDSRAELDRMTGCAEGILEALGLPYRTIVLCTGDMGFGARRTHDIEVWLPGQDAYREI 351

Query: 357 SSCSNMGDFQARRMQARCRNKTDKKPRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEVP 416
           SS S  GDFQARRM AR R +   KP  VHTLNGSGLAVGR L+AVLEN QQADG + +P
Sbjct: 352 SSVSVCGDFQARRMNARFRPEGGGKPEFVHTLNGSGLAVGRCLIAVLENGQQADGSVVLP 411

Query: 417 EVLRPYMGG 425
           EVL  Y+ G
Sbjct: 412 EVLHGYLRG 420