Pairwise Alignments

Query, 328 a.a., autoinducer 2 ABC transporter substrate-binding protein from Rahnella sp. WP5

Subject, 330 a.a., sugar ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  292 bits (748), Expect = 7e-84
 Identities = 149/320 (46%), Positives = 206/320 (64%)

Query: 7   LVSACVVSACMLFTTPSFAAKPYDIAVVAKVTGIPWFTRMEVGVKEAAQKLDVNAYQVGA 66
           L +A   S  +     + A     + VV K+ GIPWF  ME G+KE  +KL V+A+ VG 
Sbjct: 6   LAAALAASLSLAGAYTAAAQDTGKVGVVVKIGGIPWFNAMEAGIKERGEKLGVDAFMVGP 65

Query: 67  STPDPAQQVKVIEDLIAKKVDAIIVVPNDAKVLEPVLKKARDQGIVVLTHESPDQQIGQW 126
           ++ DPA QV+ IEDLIA+ V  I VVPNDAKVLEPVL KAR++GI+V+THESP Q+   W
Sbjct: 66  TSADPALQVRAIEDLIAQNVKVIGVVPNDAKVLEPVLTKAREKGIIVITHESPSQKGADW 125

Query: 127 DIETIDSQKYAEANMDELAKDMGGKGGYAIYVGSLTVPLHNAWADAAIKYQKEKYPDMHE 186
           D E   +  + EA+   LA+ MGGKG YA++VGSLTVPLHNAWADAAI+Y K+ +P+M  
Sbjct: 126 DFELASATGFGEAHAKLLAEKMGGKGEYAVFVGSLTVPLHNAWADAAIEYIKKNHPEMTL 185

Query: 187 VTSRLPVAENIDKSYSTTLDLMKTYPDLKGIIGFGSLGPIGAGQAVQQKRAKNKIAVVGI 246
           V  R  VAE++DKS ST LDL+  +PDLKG + FGS GPIGAG+A++++R   +I V+G 
Sbjct: 186 VGDRYGVAEDVDKSRSTALDLISAHPDLKGFLAFGSQGPIGAGRAIEERRKVGEIFVLGP 245

Query: 247 AMPAQAAPYLMRGDIKKVLLWDPKDAGYALVTVADQMLQGKEVTKDLSIDGLGKADVDMD 306
             P Q    +    I    +W+PK AG   VT+A ++++G+E+     I+GLG    D +
Sbjct: 246 FSPGQGQKLIKSDAISGGFMWNPKQAGEVFVTLAAKLMKGEEIKDGEEIEGLGVIHPDFE 305

Query: 307 KHVIRFNKILEVTPENAKSL 326
              I  ++++ +  E    L
Sbjct: 306 NRNIIVDQLVPINKETVADL 325