Pairwise Alignments

Query, 426 a.a., sugar ABC transporter substrate-binding protein from Rahnella sp. WP5

Subject, 434 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 93/380 (24%), Positives = 159/380 (41%), Gaps = 55/380 (14%)

Query: 2   RHPKRHALSLLALSVSLFSCASFAA-TKLTLVEVITSPARTEMLQKMLTAYKTQHPDVEI 60
           R  +  AL+ +A    LF  +  +A T +  + + T PA  +M + +   Y+++H  V+I
Sbjct: 11  RATRLSALAAVAGMALLFDASHASADTVVKWLHLETVPAYVKMWEDIAAKYESEHAGVDI 70

Query: 61  DVVSLPWGQAFE-KLGTMIQSGQYPDVVEMPDTWQG----LYASNGMLADLEPRLKGWSG 115
            +  L   +AF+ KL T++QS   P       +W G      +  G L DL   ++   G
Sbjct: 71  QLQFLE-NEAFKAKLPTLLQSDDAPHFFY---SWGGGVLKQQSETGALMDLTEAMRADGG 126

Query: 116 TPDLTDKTLTMARSSGGT----ATMIPYGFYLRAMFWNKKLFQQAGL-TDAPKTMDEFMA 170
                +K+   A   G T       +P+     + F+NK+LFQ+ G+  +  KT D+F+ 
Sbjct: 127 A---WEKSYNPAALKGFTFDDRIYAVPFKMGTISFFYNKELFQKGGVKAEDIKTWDDFLT 183

Query: 171 DAKKISALG-NGISGYCMRGGVGGTNAWMM-----FMAAMNGSPDFFDKEGNST---LTK 221
             K +   G   I+G       GG + W +     ++   NG    F+   N+      +
Sbjct: 184 AVKTLKEAGITPIAG-------GGGDKWPLHFYWSYLVMRNGGQQVFEDAKNNEGEGFLQ 236

Query: 222 PGAIKGAQFLVDM-----YQKGYAPKDSVNWGFNEIVSGFYSGKCAML------DQDPDA 270
           P  IK  + L ++     +Q GY      NW   + +  F  GK AM+      +    A
Sbjct: 237 PAIIKAGEQLAELGKLEPFQGGYL---GANW--PQTLGLFGDGKAAMILSFENTEATQRA 291

Query: 271 LIAIKNSMNPDDFSVAPMPL--GPNGKAYPTI-GYTGWSMFKQGKNQDQSWDLISFLSNK 327
                  +  ++    P P   G  G A  T+ G  GW++ K      ++ D + +L+N 
Sbjct: 292 NSGDGKGLAAENIGRFPFPAVEGGAGAATDTLGGLNGWAVTKNA--PPEALDFLRYLTNA 349

Query: 328 ENNLTWSKFVGTLPIYKGAE 347
           EN    +     +P   GAE
Sbjct: 350 ENERLMASVGMIVPAAAGAE 369