Pairwise Alignments

Query, 426 a.a., sugar ABC transporter substrate-binding protein from Rahnella sp. WP5

Subject, 436 a.a., sorbitol-binding periplasmic protein from Sinorhizobium meliloti 1021

 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 78/280 (27%), Positives = 123/280 (43%), Gaps = 21/280 (7%)

Query: 18  LFSCASFAATKLTLVEVITSPARTE----MLQKMLTAYKTQHPDVEIDVVSLPWGQAFEK 73
           L +C++ A   L   E +T           +QK+   + +++PD++++ V+L      ++
Sbjct: 8   LGTCSAVALAGLAQAETLTIATVNNGDMIRMQKLTDDFTSKNPDIQLEWVTLEENVLRQR 67

Query: 74  LGTMI--QSGQYPDVVEMPDTWQGLYASNGMLADLEPRLKGWSGTPDLTDKTLTMARSS- 130
           + T I  + GQY D++ +      ++A  G L  L+       G     D  L   RS  
Sbjct: 68  VTTDIATKGGQY-DIMTIGTYEVPIWAKQGWLLPLDDL-----GPEYDVDDLLPAIRSGL 121

Query: 131 --GGTATMIPYGFYLRAMFWNKKLFQQAGLTDAPKTMDEFMADA-KKISALGNGISGYCM 187
              G     P+      + + K LF++AGLT       +F+ADA +KI+  GN I G C+
Sbjct: 122 TIDGKLYAAPFYGESSMVMYRKDLFEKAGLTMPDAPTWDFIADAARKITDKGNEIYGICL 181

Query: 188 RGGVG-GTNAWMMFMAAMNGSPDFFDKEGNSTLTKPGAIKGAQFLVDMYQKGYAPKDSVN 246
           RG  G G N   +   A      +FD+       +P       F V +      P  S N
Sbjct: 182 RGKAGWGENMAFLTATANAFGARWFDENWKPQFDQPEWKNALDFYVKLMNDAGPPGASSN 241

Query: 247 WGFNEIVSGFYSGKCAMLDQDPDALIAIKNSMNPDDFSVA 286
            GFNE +S F +GKC M     DA +A     NP + +VA
Sbjct: 242 -GFNENLSLFQTGKCGMW---IDATVAASFVTNPKESTVA 277