Pairwise Alignments

Query, 426 a.a., sugar ABC transporter substrate-binding protein from Rahnella sp. WP5

Subject, 447 a.a., ABC transporter for Xylitol, periplasmic substrate-binding component (from data) from Dinoroseobacter shibae DFL-12

 Score = 64.3 bits (155), Expect = 7e-15
 Identities = 74/331 (22%), Positives = 145/331 (43%), Gaps = 36/331 (10%)

Query: 20  SCASFAATKLTLVEVITSPARTEMLQKMLTAYKTQHPDVEIDVVSLPWGQAFEKLGTMIQ 79
           + A +A T + +V ++      E ++ ML A++ +   ++++V+  P+  A  +      
Sbjct: 33  AAAPYAGTTVDVVFLLRPGY--EAIEAMLPAFE-EETGIKVNVIKHPYENALGEQVRDFV 89

Query: 80  SGQYPDVVEMPDTWQGLYASNGM---LADLEPRLKGWSGTPDLTDKTLTM-------ARS 129
           +G   DV  +   W G +A N     LAD++ +       PD  D  L +         +
Sbjct: 90  AGGDLDVALIDLVWIGSFAENEWILPLADVQAKF------PDAVDPDLDIDDFFPLVLNA 143

Query: 130 SGG---TATMIPYGFYLRAMFWNKKLFQQAGLTDAPKTMDEFMADAKKISALGNGISGYC 186
            GG   T   +P+  Y   MF+N+ + ++AG    P T +E + D    +   +G   + 
Sbjct: 144 FGGWNDTIYGLPFDNYSGLMFYNRCMLEEAGFDGPPSTWEE-LKDVYGPALTKDGKYAFA 202

Query: 187 M---RGGVGGTNAWMMFMAAMNGSPDFFDKEGNSTLTKPGAIKGAQFLVDMYQKGYAPKD 243
           +   R      +++   +    GS  F ++E  S L   G+  G +F  ++ +  Y P  
Sbjct: 203 LQSKRNETQSADSFARMLWPFGGS--FLNEEFRSNLMSEGSQAGLKFRQELME--YMPDG 258

Query: 244 SVNWGFNEIVSGFYSGKCAMLDQDP---DALIAIKNSMNPDDFSVAPMPLGPNGKAYPTI 300
            V +   E V+ F  G  AM+ +      ++++ + S   D   +AP P+GP G+  P +
Sbjct: 259 IVAYDHAETVNAFSQGDVAMITEWSAFYSSVVSPETSRVADCVEIAPEPMGPAGRK-PAL 317

Query: 301 GYTGWSMFKQGKNQDQ--SWDLISFLSNKEN 329
           G    ++  Q    +Q  ++  I + ++K N
Sbjct: 318 GGFSLAVASQADEAEQAAAYLFIQWATSKAN 348