Pairwise Alignments

Query, 138 a.a., large-conductance mechanosensitive channel protein MscL from Rahnella sp. WP5

Subject, 142 a.a., large-conductance mechanosensitive channel from Sinorhizobium meliloti 1021

 Score =  100 bits (249), Expect = 9e-27
 Identities = 65/143 (45%), Positives = 87/143 (60%), Gaps = 16/143 (11%)

Query: 4   MKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSFVADIIMPPLGLLI-GGVDFKQFAFVLR 62
           + EF+EF  RGNV+DLAVGVIIGAAF KIV S V D++MP +G +  GG DF  + F+  
Sbjct: 2   LNEFKEFIARGNVMDLAVGVIIGAAFSKIVDSVVNDLVMPVVGAITGGGFDFSNY-FLPL 60

Query: 63  EAQGAAPAV--------VMHYGVFIQNVFDFIIVALAIFCAITLMNKMR----RKQEDKP 110
            A   AP +        V  YG FI  + +F+I+A  IF  I L+N+ R    R +   P
Sbjct: 61  SASVTAPTLSAAREQGAVFAYGNFITVLINFLILAWIIFLLIKLVNRARASVERDKAPDP 120

Query: 111 AAPPKPTAEEALLAEIRDLLKEQ 133
           AAP  P  +  LL+EIRDLL+++
Sbjct: 121 AAP--PPQDILLLSEIRDLLRQR 141