Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Rahnella sp. WP5

Subject, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

 Score = 1208 bits (3125), Expect = 0.0
 Identities = 601/936 (64%), Positives = 747/936 (79%), Gaps = 4/936 (0%)

Query: 1   MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYTPSHVAV 60
           MA I +NPLIL+DGSSYLYRA+HA+P   ++   PT A+YGV+NM+RS++ Q+    +AV
Sbjct: 1   MAHIPDNPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAV 60

Query: 61  VFDAKGKTFRDELFEQYKSHRPPMPDDLRSQIEPLHQMVKAMGLPLLVVSGVEADDVIGT 120
           +FDAKGKTFRDE+++QYK+HRPPMPD+LR Q+EPLHQ+++AMGLPLL + GVEADDVIGT
Sbjct: 61  IFDAKGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGT 120

Query: 121 LALEAELAGHAVLISTGDKDMAQLVTPGVTLINTMNNAILGPDEVVEKYGVPPSLIIDFL 180
           LA +A  AG  VLISTGDKDMAQLV   +TLINTM N +L  + V+EK+G+PP LIID+L
Sbjct: 121 LARQASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYL 180

Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGIGGLDALYADLDKVSTLSFRGAKTMAAKLADNK 240
           ALMGD  DNIPGVPGVGEKTA ALLQGIGGL+ALYA+LDK++ L FRG+KTMA KL +N+
Sbjct: 181 ALMGDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENR 240

Query: 241 DVAYLSYQLATIKTDVKLDLTCAELTVSEPDADELHKLFGRYEFKRWLADVESGTWLSGK 300
             A LSYQLATIK DV+L+ +   L    PD D L  L+G+  FK WL ++  G   +G 
Sbjct: 241 GNAKLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGG--TGI 298

Query: 301 KSAGKAPAAAKKSAQAEDTTSAAVIEPN--QLSQDGYVTILDQATLDEWIGYLKGSEVFA 358
            +A +    +  +     T +AA+ E     + +  Y TIL++     W+  LK +E+FA
Sbjct: 299 VTADEQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAELFA 358

Query: 359 FDTETDGLDTLTANLIGLSFATEAGKAAYLPVAHDYLDAPVQLDRDEVLKQLKPILEDEK 418
           FDTETD LD + ANL+G+SFA   G+AAYLPVAHDYLDAP QL+RD V+ QLKP+LEDE 
Sbjct: 359 FDTETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLEDES 418

Query: 419 QRKVGQNLKFDRGVLLRYDIELKGIAFDTMLESYVLDSVSGRHDMDSLADRYLGHKTVSF 478
           + KVGQNLK+D  V+ RY +EL+GI  DTML+SYV +SV G+HDMDSLA R+L H  +SF
Sbjct: 419 KAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISF 478

Query: 479 EEIAGKGKNQLTFNQIALEQAAPYAAEDADVTLQLHQALWPRIAESESLKTVFTDIEMPL 538
           E++AGKGKNQLTFNQIALE+AA YAAEDADVTL+LHQ + P I +   L+ V+ +IEMPL
Sbjct: 479 EQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPL 538

Query: 539 VPVLSHIERTGVLIDQNILAAHSKELAIRLNELENKAHELAEEPFNLSSTKQLQAILYEK 598
           VPVLS IERTGV+ID  +L+A S+E+A+RL++LE  A+ELA +PFNLSS KQLQ IL+E+
Sbjct: 539 VPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILFEQ 598

Query: 599 QKLPILKKTPGGAPSTNEEVLAELALNYPLPKVILEYRGLAKLKSTYTDKLPLMINPQSG 658
            KLP+L+KTP G PSTNEEVL ELAL+YPLPKV++EYRGLAKLKSTYTDKLP MINP +G
Sbjct: 599 MKLPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPSTG 658

Query: 659 RVHTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKDYIILAADYSQIELRI 718
           RVHTSYHQAVTATGRLSS+DPNLQNIPVRN+EGRRIRQAF+AP  + I+A DYSQIELRI
Sbjct: 659 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELRI 718

Query: 719 MAHLSKDEGLLKAFAEGKDIHRATAAEVFGTPLEKVSGEQRRSAKAINFGLIYGMSAFGL 778
           MAHLS D+ LL AF +GKDIH ATAAE+ G P+++VS EQRR AKA+NFGLIYGMSAFGL
Sbjct: 719 MAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFGL 778

Query: 779 SRQLNIPRKESQRYMDLYFERYPGVLEYMERTRTQASEQGYVETLDGRRLYLPDIKSSNA 838
           ++QL IPR E+Q YMD YFERYPGV++YME TR++A++ GYVET+ GRRL+LP+I S NA
Sbjct: 779 AKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRNA 838

Query: 839 MRRKGAERAAINAPMQGTAADIIKRAMISVADWLKQPDAPRARIIMQVHDELVFEVHKDD 898
           MRRK AERAAINAPMQGTAADIIK+AM+ V +W+++    R +++MQVHDELVFEV +  
Sbjct: 839 MRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKESS 898

Query: 899 VEVASEKIRNLMEASMTLAVPLKVDVGTGENWDQAH 934
           +     K++ LME++  LAVPL  + G G+NW+QAH
Sbjct: 899 LSEIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934