Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Rahnella sp. WP5

Subject, 868 a.a., DNA polymerase I from Marinobacter adhaerens HP15

 Score =  952 bits (2460), Expect = 0.0
 Identities = 504/893 (56%), Positives = 638/893 (71%), Gaps = 25/893 (2%)

Query: 42  VLNMLRSLLLQYTPSHVAVVFDAKGKTFRDELFEQYKSHRPPMPDDLRSQIEPLHQMVKA 101
           +++MLR L   +  S + VVFDAKGKTFR +L+E+YK++RPPMP+DL  QIEP+H++VKA
Sbjct: 1   MISMLRRLEQDFPGSKMVVVFDAKGKTFRHDLYEEYKANRPPMPEDLACQIEPIHEIVKA 60

Query: 102 MGLPLLVVSGVEADDVIGTLALEAELAGHAVLISTGDKDMAQLVTPGVTLINTMNNAILG 161
           MGLPLL V+GVEADDVIGTLA EA   G  V++STGDKDMAQLV+  VTLINTM    + 
Sbjct: 61  MGLPLLTVTGVEADDVIGTLANEATSKGIDVVVSTGDKDMAQLVSDHVTLINTMTETRMD 120

Query: 162 PDEVVEKYGVPPSLIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGIGGLDALYADLDKV 221
            D VVEK+GV P  I+D+LAL+GD  DNIPGV   G KTA   LQ    LD +    D++
Sbjct: 121 RDGVVEKFGVTPEQIVDYLALVGDKVDNIPGVNKCGPKTAVKWLQSYDNLDNVIEHADEI 180

Query: 222 STLSFRGAKTMAAKLADNKDVAYLSYQLATIKTDVKLDLTCAELTVSEPDADELHKLFGR 281
                     +   L D  +   LS +LATI+TDV+LD    +L + E D  +L +LF  
Sbjct: 181 KG-------KIGEYLRDATETLPLSRELATIRTDVELDFGLEDLKLREQDDQQLLELFRE 233

Query: 282 YEFKRWLADVESGTWLSGKKSAGKAPAAAKKSAQAEDTTSAAVIEPNQLSQDGYVTILDQ 341
           YEF+ W+A++E               +++  +A+A D T        +  +  Y  I DQ
Sbjct: 234 YEFRSWIAELEEDE------------SSSSSNARAGDETPKP-----ETGEKDYSIITDQ 276

Query: 342 ATLDEWIGYLKGSEVFAFDTETDGLDTLTANLIGLSFATEAGKAAYLPVAHDYLDAPVQL 401
             LD+W+  L  +E+FAFDTET  L  + A ++G+SFA + G+AAY+P+ HDY+ AP QL
Sbjct: 277 KELDQWLERLGAAELFAFDTETTSLRYMDAEIVGVSFAVKPGEAAYVPLGHDYMGAPEQL 336

Query: 402 DRDEVLKQLKPILEDEKQRKVGQNLKFDRGVLLRYDIELKGIAFDTMLESYVLDSVSGRH 461
           DRD+VL QLKP+LE+    KVGQNLK+D+ VL  + I L+GIA DTMLESYVL+SV+ RH
Sbjct: 337 DRDQVLDQLKPLLENPDLAKVGQNLKYDKNVLANHGITLEGIAEDTMLESYVLNSVATRH 396

Query: 462 DMDSLADRYLGHKTVSFEEIAGKGKNQLTFNQIALEQAAPYAAEDADVTLQLHQALWPRI 521
           DMDSLA  YLG KT SFE IAGKG  QLTFNQI LE+AAPYAAEDAD+TL+LHQ L P++
Sbjct: 397 DMDSLAMYYLGEKTTSFESIAGKGAKQLTFNQIDLEKAAPYAAEDADITLRLHQTLRPKL 456

Query: 522 AESESLKTVFTDIEMPLVPVLSHIERTGVLIDQNILAAHSKELAIRLNELENKAHELAEE 581
            E+  L  V+ DI++PLVPVLS +E+ G LI  + L  HS+ELA R+ ELE +AHE+A E
Sbjct: 457 KETGKLAAVYEDIDLPLVPVLSRMEQRGTLISASTLRQHSQELAERMAELEKEAHEVAGE 516

Query: 582 PFNLSSTKQLQAILYEKQKLPILKKTPGGAPSTNEEVLAELALNYPLPKVILEYRGLAKL 641
            FNL STKQLQAI Y+K  LP++KK                  N    +VILE+R L+KL
Sbjct: 517 TFNLGSTKQLQAIFYDKMGLPVIKKPQRARRQQRSRCFRNSPTNTNC-RVILEHRSLSKL 575

Query: 642 KSTYTDKLPLMINPQSGRVHTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAP 701
           KSTYTD LP +I+ ++GRVHTSYHQAVTATGRLSSS+PNLQNIP+R+++GRRIRQAFIAP
Sbjct: 576 KSTYTDTLPELIHHRTGRVHTSYHQAVTATGRLSSSEPNLQNIPIRSEQGRRIRQAFIAP 635

Query: 702 KDYIILAADYSQIELRIMAHLSKDEGLLKAFAEGKDIHRATAAEVFGTPLEKVSGEQRRS 761
           + Y ++AADYSQIELRIMAHLS D+GLLKAF +G+DIH+ATA+EVFG  L+ VS +QRRS
Sbjct: 636 EGYKLVAADYSQIELRIMAHLSGDKGLLKAFEKGEDIHKATASEVFGVSLDDVSSDQRRS 695

Query: 762 AKAINFGLIYGMSAFGLSRQLNIPRKESQRYMDLYFERYPGVLEYMERTRTQASEQGYVE 821
           AKAINFGLIYGMSAFGLSRQL++ RK +Q Y+D YFERYPGVL+YM+  R QA + G+VE
Sbjct: 696 AKAINFGLIYGMSAFGLSRQLDVERKLAQEYIDRYFERYPGVLKYMDNIRKQAHDDGFVE 755

Query: 822 TLDGRRLYLPDIKSSNAMRRKGAERAAINAPMQGTAADIIKRAMISVADWLKQPDAPRAR 881
           TL GRRLYLP+I + N   ++ AER AINAPMQGTAADIIKRAM+ V +WL +  A  AR
Sbjct: 756 TLFGRRLYLPEINARNKQLQQAAERTAINAPMQGTAADIIKRAMVDVENWLLKEHADEAR 815

Query: 882 IIMQVHDELVFEVHKDDVEVASEKIRNLMEASMTLAVPLKVDVGTGENWDQAH 934
           + MQVHDEL+ EV +  ++     +   M A+  L VPL V+ G G+NWD+AH
Sbjct: 816 MTMQVHDELILEVKESALDKIRSGLEKRMSAAAELDVPLLVEAGVGDNWDEAH 868