Pairwise Alignments

Query, 693 a.a., ATP-dependent DNA helicase RecG from Rahnella sp. WP5

Subject, 703 a.a., ATP-dependent DNA helicase RecG (NCBI) from Rhodospirillum rubrum S1H

 Score =  476 bits (1225), Expect = e-138
 Identities = 295/693 (42%), Positives = 416/693 (60%), Gaps = 33/693 (4%)

Query: 1   MKGRLLDAI--PLTSLSGVGASQADKLAKL-GLETIQDLLLHLPLRYEDRTRLYTINDLQ 57
           M+  LLD +  PLTSL G G + A  +A+L G + + DLL HLP    DR     I +  
Sbjct: 1   MRPSLLDPLFRPLTSLKGAGKTMAPLIARLIGGDKVVDLLWHLPSGLVDRRFSPLIAEAP 60

Query: 58  PGIFATIEGEVLRSDISFGRRRM---LTCQISDGTGMATLRFFNFNAAMKNSLA-TGRRV 113
            G+  T+   V        R      + C+  D +G  TL FF+  A   N L   G   
Sbjct: 61  DGVVVTLTVVVEAHQEPPPRSPSPYRVVCR--DASGFVTLVFFHGRARYLNDLLPVGETR 118

Query: 114 TAYGEIKRGTIGAEIIHPEYRIQGENSEVVLQESLTPVYPTTEGIRQATLRKLTDQALEL 173
              G+++R     +I+HP + +    +E V +  + PVYP + G+    L +L  QAL  
Sbjct: 119 VISGKVERFGGAPQIVHPTHVVPLAEAEAVCR--VEPVYPLSGGVAGKVLARLIAQAL-- 174

Query: 174 LDTVPVAELLPEELSRSLIPLPQ-------ALHLLHRPPPDIQLADLEKGHHPAQRRLIM 226
            D +P     P+E   + +   +       AL  +H P    +  DL +  HPA+RRL  
Sbjct: 175 -DDIPDPAAWPDEWIDAPLKAREGWPGWIDALRAVHAPE---EAEDL-RPDHPARRRLAY 229

Query: 227 EELLAHNLSMLAVRAGTQSYKALPLHHDDRLKNQFLASLPFSPTGAQARVVAEIEQDLAK 286
           +ELLA  L++L VR   ++ +  P+     L+ + LA+LPF+ TGAQ+R +AEI+ D+A 
Sbjct: 230 DELLATQLALLLVRRAARTVRGRPIVGTGALRAKVLAALPFALTGAQSRSLAEIDGDMAS 289

Query: 287 SYPMMRLVQGDVGSGKTLVAALAALCAIAQGQQVGLMAPTELLAEQHANNFRQWFEPLGI 346
              M+RL+QGDVGSGKT+VA L  L A+  G Q  LMAPTE+LA QH           G+
Sbjct: 290 PARMLRLLQGDVGSGKTVVALLTMLTAVEAGAQAALMAPTEILARQHIETLAPLCASAGV 349

Query: 347 QVGWLAGKQKGKARQAQQDAIASGQVSMVVGTHAIFQEQVLFSSLSLVIIDEQHRFGVHQ 406
           ++G L G+ KG+AR A  +A+A+G++ ++VGTHA+FQ+ V+F++L++V++DEQHRFGVHQ
Sbjct: 350 RLGLLTGRDKGRARAALLEALAAGEIDILVGTHALFQDDVVFAALAVVVVDEQHRFGVHQ 409

Query: 407 RLALWEKGLQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDT 466
           RLAL +KG         L+MTATPIPRTL +T Y D+D S +DE PPGR P  T  +P  
Sbjct: 410 RLALSDKGRAVDV----LVMTATPIPRTLTLTHYGDMDISRLDEKPPGRLPADTRVLPID 465

Query: 467 RRSDIISRVKSACEQENRQAYWVCTLIEESEMLEAQAAEATWEGLKEAL-PAL--NIGLV 523
           R  D+I+ V  A +    + YWVC LIE+SE  +  AA      L + L P L   +GLV
Sbjct: 466 RLDDVIAAVARAID-GGAKVYWVCPLIEDSETGDMAAAVDRQALLADRLGPRLGPRVGLV 524

Query: 524 HGRMKAQEKQAVMQAFKQGEVQLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRG 583
           HGRMK  EK AVM+AF    + LLVATTVIEVGV+VP+A++M+IE+ ER GLAQLHQLRG
Sbjct: 525 HGRMKPGEKDAVMEAFSGNGLDLLVATTVIEVGVNVPSATVMVIEHAERFGLAQLHQLRG 584

Query: 584 RVGRGAVASHCVLLYKTPLSKTAQKRLQVLRDSNDGFVIAQQDLEIRGPGELLGTRQTGS 643
           R+GRG   S C+LLY  PL +TA+ RL+ +R ++DGF IA++DL +RG GE+LGTRQ+G 
Sbjct: 585 RIGRGGGRSTCLLLYAPPLGETARARLETMRRTDDGFEIAEEDLRLRGAGEVLGTRQSGL 644

Query: 644 AEFKVADLLRDQAMIPDVQRIARYLQQQFPDHA 676
             F++ D L  + ++   ++ A  + +  PD A
Sbjct: 645 PVFRLIDPLLAEDLLAIARKQAEVIVETDPDLA 677