Pairwise Alignments

Query, 296 a.a., peptide ABC transporter permease SapC from Rahnella sp. WP5

Subject, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

 Score =  319 bits (818), Expect = 4e-92
 Identities = 158/293 (53%), Positives = 218/293 (74%), Gaps = 1/293 (0%)

Query: 4   DNVYREKQVPSPLRHTWGIFYRDTLSMIGFYGVLGLLLLCIFGHLLAPYALDQQFLGYQL 63
           D++Y+E+ +P+     W  F  + L+M G + +L + L+ I    +APY   Q      L
Sbjct: 4   DSIYQEEHIPTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYD-PQMHSSVLL 62

Query: 64  LPPSWSRYGNVSFFLGTDDLGRDLLSRMLTGAAPTIGGALVITLAASLCGVIIGVLAGIS 123
           LPPSW   G V +FLGTDDLGRD+LSR++ G+  +IG A++ITL A+L G  IG LAG++
Sbjct: 63  LPPSWEPEGTVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMT 122

Query: 124 RGLKSAILNHIFDTLLSIPSLLLAIVVVAFIGPKLEHAMLAVWLALLPRISRTIYSAVHD 183
           +GL S+ LNHI DT++SIPSLLLAI+ VAF+G    + +LA+ LAL+PR  R++Y AVH+
Sbjct: 123 KGLLSSTLNHILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHN 182

Query: 184 ELEKEYVVAVRLDGASTWQILRYAVLPNIVAVLATEFTRALSMAILDIAALGFLDLGAQL 243
           E+EK+YV+A RLDGA+ + +L +++ PNI+ ++  E T ALS+AILDI ALGFL LGAQ 
Sbjct: 183 EVEKDYVMAARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQS 242

Query: 244 PSPEWGAMLGDSLELVYVAPWTVMLPGAAILISVLLINLLGDGVRRAINAGVE 296
           PS EWGAMLGDS+EL+Y+APWTV LPG AI+ +V++INL+GDG R+A+NAGVE
Sbjct: 243 PSTEWGAMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALNAGVE 295