Pairwise Alignments

Query, 304 a.a., branched-chain amino acid ABC transporter permease from Rahnella sp. WP5

Subject, 300 a.a., high-affinity branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  300 bits (767), Expect = 4e-86
 Identities = 150/303 (49%), Positives = 215/303 (70%), Gaps = 7/303 (2%)

Query: 4   FFLQQLFNGITLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIALALLSFFGL 63
           +F+QQL NG+TLG++YG+IAIGYTMVYGIIGMINFAHG+++M+  +   I   LL+ F +
Sbjct: 3   YFVQQLVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLLLTTF-I 61

Query: 64  HSFP--LLILGTLVFTIVVTGVYGWAIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQI 121
              P  L +L  +V  ++   ++ W IER+AY+PLR S RLAPLI+AIGMS++L N+ Q+
Sbjct: 62  AGVPVVLALLIMMVVGMLTAALWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQV 121

Query: 122 SQGPRQQGIPTMLDGAFRFHIGESFVQMTYTKIFILVASLAGMLVLSWIISNTKLGRMCR 181
           +QGPR + IP ++   +        + ++  +I I+V +   + V  +I++ T LGR  R
Sbjct: 122 TQGPRNKPIPPLVSSVYDLF----GISVSLKQIIIVVITAILLSVFWYIVNRTPLGRAQR 177

Query: 182 AVQQDRKMASILGINTDRIISLVFMIGAAMAGLAGVLVTMNYGTFDFYAGFIIGIKAFTA 241
           A +QDRKMA++LG++ DR IS+ F++GAA+A +AG +  M YG   F  GF  G+KAFTA
Sbjct: 178 ATEQDRKMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTDGFAPGVKAFTA 237

Query: 242 AVLGGIGSLPGAMLGGLILGIAEAQFSGMVNSDYKDVFSFGLLVVILIFRPQGLLGRPVV 301
           AVLGGIGSLPGA+LGGL++G+ E+ +S     DYKDV +F +L ++LIF+P G+LGRP V
Sbjct: 238 AVLGGIGSLPGAVLGGLLIGLIESLWSAYFTIDYKDVATFSILAIVLIFKPSGILGRPEV 297

Query: 302 TKV 304
            KV
Sbjct: 298 EKV 300