Pairwise Alignments

Query, 304 a.a., branched-chain amino acid ABC transporter permease from Rahnella sp. WP5

Subject, 304 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  352 bits (903), Expect = e-102
 Identities = 176/303 (58%), Positives = 229/303 (75%), Gaps = 1/303 (0%)

Query: 3   SFFLQQLFNGITLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIALALLSFFG 62
           ++FLQQL NG+TLGA+YGLIAIGYTMVYGIIGMINFAHGE+YMI A+L  I   LL    
Sbjct: 2   AYFLQQLINGLTLGAIYGLIAIGYTMVYGIIGMINFAHGEIYMIGAFLTVICFVLLGGPE 61

Query: 63  LHSFPLLILGTLVFTIVVTGVYGWAIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQIS 122
             S PL +L  LV ++V T  YGW +ER+AY+PLR S RLAPLISAIGMS+ LQNY QI+
Sbjct: 62  FASVPLALLLILVVSMVFTAAYGWTVERLAYRPLRGSFRLAPLISAIGMSIALQNYVQIT 121

Query: 123 QGPRQQGIPTMLDGAFR-FHIGESFVQMTYTKIFILVASLAGMLVLSWIISNTKLGRMCR 181
           QG R + I  ++ G F  F+ G   VQ++Y +IFI + ++  M+  +++I+ T +GR  R
Sbjct: 122 QGARVKPIQPVIRGGFEVFNQGGFAVQISYLQIFIWILTIGLMMGFTYVITQTSMGRQQR 181

Query: 182 AVQQDRKMASILGINTDRIISLVFMIGAAMAGLAGVLVTMNYGTFDFYAGFIIGIKAFTA 241
           A +QDRKMAS++G+N DR ISL F+IGA +A +AG++ T+ YG  DFY GF+ G+KAFTA
Sbjct: 182 ACEQDRKMASLIGVNVDRTISLTFVIGALLAAVAGLITTLYYGVIDFYIGFLAGMKAFTA 241

Query: 242 AVLGGIGSLPGAMLGGLILGIAEAQFSGMVNSDYKDVFSFGLLVVILIFRPQGLLGRPVV 301
           AVLGGIGSLPGAMLGGL++G+ EA +S     +YKDV +FG+LV++LIF+P G LG+P V
Sbjct: 242 AVLGGIGSLPGAMLGGLLIGLIEAFWSAYFTIEYKDVATFGILVLVLIFKPTGFLGKPEV 301

Query: 302 TKV 304
            KV
Sbjct: 302 EKV 304