Pairwise Alignments

Query, 304 a.a., branched-chain amino acid ABC transporter permease from Rahnella sp. WP5

Subject, 302 a.a., high-affinity branched-chain amino acid ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  287 bits (734), Expect = 2e-82
 Identities = 149/302 (49%), Positives = 207/302 (68%), Gaps = 5/302 (1%)

Query: 4   FFLQQLFNGITLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIALALLSFFGL 63
           +F + LF G+T G++Y LIA+GYTMVYGII +INFAHGEVYMI A+   I   +L  +G 
Sbjct: 5   YFCELLFGGLTRGSIYALIALGYTMVYGIIELINFAHGEVYMIGAFTALIVAGVLGIYGF 64

Query: 64  HSFPLLILGTLVFTIVVTGVYGWAIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQISQ 123
               +LI+  +V  ++    YG+ +E++AYKPLR++ RL+PLISAIGMS+ LQNY  ++Q
Sbjct: 65  PEAGILIIAAIV-AVIYCAAYGFTLEKVAYKPLRDAPRLSPLISAIGMSIFLQNYVILAQ 123

Query: 124 GPRQQGIPTMLDGAFRFHIGESFVQMTYTK-IFILVASLAGMLVLSWIISNTKLGRMCRA 182
                  P ++       I E    +T T  + I+V S   M+ L+  I  T++G+  RA
Sbjct: 124 TSDFVPFPRLVPD---LAILEPIAHITGTSDVLIIVTSAITMVGLTLFIKYTRMGKAMRA 180

Query: 183 VQQDRKMASILGINTDRIISLVFMIGAAMAGLAGVLVTMNYGTFDFYAGFIIGIKAFTAA 242
             Q+RKMA +LGI+ DR+ISL F+IG+++A + GVL+  + G  +F  GFI GIKAFTAA
Sbjct: 181 TAQNRKMAMLLGIDADRVISLTFIIGSSLAAIGGVLIASHIGQVNFAIGFIAGIKAFTAA 240

Query: 243 VLGGIGSLPGAMLGGLILGIAEAQFSGMVNSDYKDVFSFGLLVVILIFRPQGLLGRPVVT 302
           VLGGIGS+PGAM GGL+LG+ E+  +G V+SDY+D  +F LLV+ILIFRP G+LG+P   
Sbjct: 241 VLGGIGSIPGAMAGGLVLGLCESFATGYVSSDYEDALAFALLVLILIFRPSGILGKPKTQ 300

Query: 303 KV 304
           KV
Sbjct: 301 KV 302