Pairwise Alignments

Query, 610 a.a., ATP-dependent DNA helicase RecQ from Rahnella sp. WP5

Subject, 707 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas stutzeri RCH2

 Score =  550 bits (1418), Expect = e-161
 Identities = 286/595 (48%), Positives = 397/595 (66%), Gaps = 1/595 (0%)

Query: 13  AHQVLRDTFGYQQFRPGQQTIINTALSGRDCLVVMPTGGGKSLCYQIPALVMDGLTLVVS 72
           A ++L+D FGY  FR  Q  II    SG D LV+MPTGGGKSLCYQ+PAL+ DGL +VVS
Sbjct: 5   AQRILKDVFGYDAFRGNQGAIIERVGSGGDALVLMPTGGGKSLCYQVPALLRDGLAVVVS 64

Query: 73  PLISLMKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRAGRIKMLYIAPERLMMGDFL 132
           PLI+LM DQV  L   GV A  LNST + ++Q ++    R   IKMLY+APERL+    L
Sbjct: 65  PLIALMDDQVATLDELGVSAVALNSTLSPDEQRDIAERIRRNEIKMLYLAPERLVQPRML 124

Query: 133 EQLQQWNPAMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATADEATRNDI 192
             LQ+   A+ A+DEAHC+SQWGHDFRPEY  LGQL   +P +P IALTATAD  TR +I
Sbjct: 125 AFLQRLEIALFAIDEAHCVSQWGHDFRPEYMQLGQLSELFPGVPRIALTATADMRTREEI 184

Query: 193 VRLLELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRGKSGIIYCNSRAKVEDT 252
           V+ L L +    +SSFDRPNI Y +V K +P  QL+ F+ ++RG +GI+YC SR KV+D 
Sbjct: 185 VQRLHLENAERFLSSFDRPNIFYRIVPKEQPRKQLLGFLAERRGDAGIVYCMSRKKVDDF 244

Query: 253 AARLQSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGINKPNVRFVVHFD 312
           AA L  +G     YHAGL N+ RA  Q+ F  ++  I+VAT+AFGMGI+KPNVRFV H D
Sbjct: 245 AAFLTEQGFPALPYHAGLPNELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLD 304

Query: 313 IPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQ-QDVERHKLNAM 371
           +P+++E+YYQETGRAGRDGLPA+A + Y   D+ +L++ L       + + VE+HKL+AM
Sbjct: 305 LPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLNNSEGDERHKRVEQHKLDAM 364

Query: 372 NAFAEAQTCRRLVLLNYFGEGKQNACGNCDVCLDPPKRYDGLLDAQKALSVVARVGQRFG 431
            A  E   CRR  LL YF E   + CG+CD C+D  + +D    A++ALS + R GQR+G
Sbjct: 365 LALCEETRCRRQALLAYFDEELPSPCGHCDNCVDGVQTWDATEPARQALSAIYRSGQRYG 424

Query: 432 LGYVVEVLRGSNNQRIREYGHDKLTVYGIGKEHSNEHWTSVVRQLIHLGLITQNIAMHSA 491
           +G++V+VL G +N ++R  GH  L+V+G+GK  +   W S+ RQL+  GL   ++     
Sbjct: 425 VGHLVDVLLGRDNDKVRGLGHQHLSVFGVGKALAETEWRSLFRQLVARGLADVDLDGFGG 484

Query: 492 LQLTESARPVLRGEIPLQLAVPRIQTLKIKSSASQKTYGGNYDRKLFAKLRKLRKSLADD 551
           L+L++S RP+LRGE+ L+L           ++++      + +R+ +  LR LR+ LA++
Sbjct: 485 LRLSDSCRPLLRGEVSLELRRDLSSKAPKPAASAASQLVRSEERETWEALRTLRRKLAEE 544

Query: 552 NNVPPYVVFNDTTLLEMAEHLPVSASDLLDITGVGQRKLEKFGRPFMAMIRDHID 606
           ++VPPYV+F D TLLEM    P S SD+  I+GVG RKLE++G+ F+ +++ + D
Sbjct: 545 HSVPPYVIFPDATLLEMLRSQPASLSDMAMISGVGARKLERYGQAFLEVLQGNSD 599