Pairwise Alignments

Query, 610 a.a., ATP-dependent DNA helicase RecQ from Rahnella sp. WP5

Subject, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

 Score =  808 bits (2087), Expect = 0.0
 Identities = 390/591 (65%), Positives = 480/591 (81%), Gaps = 1/591 (0%)

Query: 15  QVLRDTFGYQQFRPGQQTIINTALSGRDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPL 74
           +VL + FGYQQFR GQQ +I  AL+GRD LV+MPTGGGKSLCYQIPALV++G+TLV+SPL
Sbjct: 18  RVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPL 77

Query: 75  ISLMKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRAGRIKMLYIAPERLMMGDFLEQ 134
           ISLMKDQVDQL A GV A C+NST  RE+ + +     AG++K+LY++PER++  +F+E+
Sbjct: 78  ISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIER 137

Query: 135 LQQWNPAMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATADEATRNDIVR 194
           L     AM+AVDEAHCISQWGHDFRPEY +LGQLK R+P +PV+ALTATAD+ATR+DI++
Sbjct: 138 LSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIMQ 197

Query: 195 LLELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRGKSGIIYCNSRAKVEDTAA 254
            L+LN+P   + SFDRPNIRY LVEK KP+ Q+IR+++ QRG+ GIIYC SR KVE    
Sbjct: 198 RLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEMLTE 257

Query: 255 RLQSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIP 314
           +L    +   +YHAG+D D RA VQE FQRDDLQIVVATVAFGMGINKPNVRFVVHFDIP
Sbjct: 258 KLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIP 317

Query: 315 RTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQQDVERHKLNAMNAF 374
           R IESYYQETGRAGRDGLPAEA++LYDPADM WLRR L+EKP GAQ+ VE HKL AM AF
Sbjct: 318 RNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTAMGAF 377

Query: 375 AEAQTCRRLVLLNYFGEGKQNACGNCDVCLDPPKRYDGLLDAQKALSVVARVGQRFGLGY 434
           AEAQTCRR VLLNYFGE +   CGNCD+CLDPPKR+D   +A+KALS V RV Q FG+GY
Sbjct: 378 AEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYRVNQNFGIGY 437

Query: 435 VVEVLRGSNNQRIREYGHDKLTVYGIGKEHSNEHWTSVVRQLIHLGLITQNIAMHSALQL 494
           VVEVLRG  N RIRE+GHDK+T YGIG++HS+++W S+ RQLIH G++ QNI  +S LQL
Sbjct: 438 VVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQNITRNSTLQL 497

Query: 495 TESARPVLRGEIPLQLAVPRIQTLKIKSSASQKTYGGNYDRKLFAKLRKLRKSLADDNNV 554
           TE ARP+LRGE+ ++LAVPR+ T   +++ S K  G NYD+KLFAKLRKLRKS+ADD  +
Sbjct: 498 TEEARPLLRGEMNIELAVPRLDT-AARAAKSDKLSGKNYDKKLFAKLRKLRKSIADDEGL 556

Query: 555 PPYVVFNDTTLLEMAEHLPVSASDLLDITGVGQRKLEKFGRPFMAMIRDHI 605
           PPYVVF+D TL++MAE +P S  ++L + GVGQRKLEK+  PF+ +I++H+
Sbjct: 557 PPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQEHL 607