Pairwise Alignments

Query, 610 a.a., ATP-dependent DNA helicase RecQ from Rahnella sp. WP5

Subject, 636 a.a., ATP-dependent DNA helicase from Sinorhizobium meliloti 1021

 Score =  520 bits (1340), Expect = e-152
 Identities = 269/592 (45%), Positives = 383/592 (64%), Gaps = 6/592 (1%)

Query: 16  VLRDTFGYQQFRPGQQTIINTALSGRDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLI 75
           +L+  +GY  FR  QQ +++  ++G D +V+ PTG GKSLC+QIPAL   G+ +VVSPLI
Sbjct: 40  LLKRIYGYSTFRGQQQAVVDHVVAGGDAVVLFPTGAGKSLCFQIPALCRRGVGIVVSPLI 99

Query: 76  SLMKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRAGRIKMLYIAPERLMMGDFLEQL 135
           +LM+DQV+ L   G+ A  LNS+ TR++ + V        + +LY+ PER +   F E +
Sbjct: 100 ALMRDQVEALKQLGIRAAALNSSLTRDEAIAVRRALSRDELDLLYVTPERAVTDGFAEMI 159

Query: 136 QQWNPAMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATADEATRNDIVRL 195
              + A+ A+DEAHC+SQWGHDFRPEYR LG L  R+P +P IALTATAD  TR+D++  
Sbjct: 160 ADADIALFAIDEAHCVSQWGHDFRPEYRGLGCLAERFPGVPRIALTATADPHTRDDMIER 219

Query: 196 LELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRGKSGIIYCNSRAKVEDTAAR 255
           L L    +  SSFDRPNI Y +VE+ +P  QL+RF+   +  SGI+YC SRAKVEDTA  
Sbjct: 220 LGLGGARVFASSFDRPNIAYEIVERDQPRQQLLRFLSRFKDASGIVYCLSRAKVEDTAEW 279

Query: 256 LQSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPR 315
           L ++G+    YHAG++   R   Q+ F +++   +VATVAFGMGI+KP+VR+V H D+P 
Sbjct: 280 LDAQGIRALPYHAGMERAARDAHQDAFLKEENLCLVATVAFGMGIDKPDVRYVAHLDLPG 339

Query: 316 TIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQ-QDVERHKLNAMNAF 374
           ++E+YYQETGRAGRDGLP+E  + Y  AD+   RR ++E  A  + + +ER KLN++ A 
Sbjct: 340 SVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRRRMIDEGGAPEEIKRIERAKLNSLLAI 399

Query: 375 AEAQTCRRLVLLNYFGEGKQNACGNCDVCLDPPKRYDGLLDAQKALSVVARVGQRFGLGY 434
            E   CRR  +L +FGE     CG+CD CL P + +DG   A KAL+ V R G+RFG G+
Sbjct: 400 CETAGCRRQAILAHFGEAHPGGCGHCDTCLKPVETWDGTEAAIKALAAVYRTGERFGTGH 459

Query: 435 VVEVLRGSNNQRIREYGHDKLTVYGIGKEHSNEHWTSVVRQLIHLGLITQNIAMHSALQL 494
           +++VL GS N++   +GH  + V+G GK+     W S+ RQL+  GLI+ + A   AL+L
Sbjct: 460 LIDVLTGSVNEKTERFGHVDMPVFGAGKDLPARTWQSIFRQLLAAGLISVDHAAFGALKL 519

Query: 495 TESARPVLRGEIPLQLAVPRIQTLKIKSS-----ASQKTYGGNYDRKLFAKLRKLRKSLA 549
              AR V R E  +     R  + K K++     AS+++     D +LF +LR  R SLA
Sbjct: 520 EPEARSVFRRERQVLFRKDRPSSGKAKTARGSKPASERSDLAGSDLELFERLRSERLSLA 579

Query: 550 DDNNVPPYVVFNDTTLLEMAEHLPVSASDLLDITGVGQRKLEKFGRPFMAMI 601
            + +VPPYVVF DTTL+ +A+  P    +LLD+ G+G+ K E++G  F+A+I
Sbjct: 580 REMDVPPYVVFPDTTLIALAKRRPRDFEELLDVPGIGESKRERYGEAFLAVI 631