Pairwise Alignments

Query, 610 a.a., ATP-dependent DNA helicase RecQ from Rahnella sp. WP5

Subject, 629 a.a., ATP-dependent DNA helicase RecQ (NCBI) from Rhodospirillum rubrum S1H

 Score =  518 bits (1333), Expect = e-151
 Identities = 277/597 (46%), Positives = 373/597 (62%), Gaps = 9/597 (1%)

Query: 13  AHQVLRDTFGYQQFRPGQQTIINTALSGRDCLVVMPTGGGKSLCYQIPALVMDGLTLVVS 72
           A  +L D +G++ FRPGQ+ II   L G D L VMPTG GKSLCYQ+PAL+  G+TLVVS
Sbjct: 31  ARVLLADIWGFKDFRPGQEAIIRAVLGGEDVLAVMPTGSGKSLCYQLPALMRQGVTLVVS 90

Query: 73  PLISLMKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRAGRIKMLYIAPERLMMGDFL 132
           PLI+LM+DQV QL A GV AG LNS+   +    VM G R GR+K+LY+APERL   D L
Sbjct: 91  PLIALMRDQVAQLDALGVAAGALNSSIDMDGYRRVMDGLRGGRLKLLYVAPERLARPDTL 150

Query: 133 EQLQQWNPAMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATADEATRNDI 192
             L+      LA+DEAHC+SQWGHDFRP+Y  LG+++     +  +A TATAD ATR+DI
Sbjct: 151 SLLRDSGVTALAIDEAHCVSQWGHDFRPDYLCLGKVREDLGGVQTVAFTATADAATRDDI 210

Query: 193 VRLLELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRGKSGIIYCNSRAKVEDT 252
              L    P + +  FDRPN+R  +  K     ++  FV    G+SG+IYC SRA+ E+ 
Sbjct: 211 AGRLFPAPPRLFIGGFDRPNLRLAMRPKGDTRRRMFEFVAAHTGESGVIYCGSRARTEEL 270

Query: 253 AARLQSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGINKPNVRFVVHFD 312
           A  L+  G     YHAGLD   R   Q+ F  +D  ++VATVAFGMGI+KP+VRFV H D
Sbjct: 271 AEGLRGAGHRALPYHAGLDKPVRDANQDAFLAEDGLVMVATVAFGMGIDKPDVRFVCHAD 330

Query: 313 IPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQQD-VERHKLNAM 371
           +PR+IE+YYQE GRAGRDGL A+ +  Y   D+   R  +EE  AG +Q  VE  +LNA+
Sbjct: 331 MPRSIEAYYQEIGRAGRDGLAADTLTFYGLDDVRLHRMRIEESQAGDEQKRVEIQRLNAL 390

Query: 372 NAFAEAQTCRRLVLLNYFGEGKQNACGNCDVCLDPPKRYDGLLDAQKALSVVARVGQRFG 431
            A  EA  CRR  LL YFGE +   CGNCD+C++  + +DG ++AQKA+S + R GQRF 
Sbjct: 391 LALCEAPRCRRQTLLGYFGE-RTEPCGNCDLCINGVESFDGTIEAQKAMSAMLRTGQRFA 449

Query: 432 LGYVVEVLRGSNNQRIREYGHDKLTVYGIGKEHSNEHWTSVVRQLIHLGLITQNIAMHSA 491
             +++ +L G+    I +YGHDKL  +G+GK+H+   W S+ RQ+   GLI+ +IA H  
Sbjct: 450 TEHLINILVGTQTDAITQYGHDKLPTFGVGKDHTRNVWRSIFRQISAGGLISLDIANHGR 509

Query: 492 LQLTESARPVLRGEIPLQLAVPRIQTL-------KIKSSASQKTYGGNYDRKLFAKLRKL 544
             +TE+ R VLRG+  + L    ++         K + +++        DR LF  LR  
Sbjct: 510 WLMTEAGRAVLRGQAGVALRSDVLEAAGRGERKDKERRASAPAVQLEADDRALFDALRAK 569

Query: 545 RKSLADDNNVPPYVVFNDTTLLEMAEHLPVSASDLLDITGVGQRKLEKFGRPFMAMI 601
           R+ LA   NVP YVVF D TL+E+A   P S   + +I G+GQ KL ++G  F+ +I
Sbjct: 570 RQELARAENVPAYVVFADRTLIELATKRPPSLDAMREIHGIGQSKLARYGAAFLEVI 626