Pairwise Alignments

Query, 610 a.a., ATP-dependent DNA helicase RecQ from Rahnella sp. WP5

Subject, 610 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella loihica PV-4

 Score =  687 bits (1773), Expect = 0.0
 Identities = 340/590 (57%), Positives = 440/590 (74%), Gaps = 3/590 (0%)

Query: 17  LRDTFGYQQFRPGQQTIINTALSGRDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLIS 76
           L+  FGY+ FR GQ+ +I     G+D LV+MPTGGGKSLCYQ+PALV+ GLTLVVSPLIS
Sbjct: 20  LQTVFGYRTFRTGQREVIEQVCGGQDALVIMPTGGGKSLCYQLPALVLHGLTLVVSPLIS 79

Query: 77  LMKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRAGRIKMLYIAPERLMMGDFLEQLQ 136
           LMKDQVD L   GV A  LNS+Q+RE+ L +      G +K+LY++PERL+   F+E+L 
Sbjct: 80  LMKDQVDSLKQMGVAAAYLNSSQSREEALTIYRQLHNGELKLLYVSPERLLTDSFIERLH 139

Query: 137 QWNPAMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATADEATRNDIVRLL 196
               ++ A+DEAHCISQWGHDFRPEY ALGQLK  +P++P++ALTATAD+ATR DI + L
Sbjct: 140 NLPLSLFAIDEAHCISQWGHDFRPEYAALGQLKQLFPRVPMMALTATADKATREDICQRL 199

Query: 197 ELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRGKSGIIYCNSRAKVEDTAARL 256
            +  P   ++SFDRPNIRYT+ EK    +QL +F+Q Q G SGIIYC+SR +V++ A RL
Sbjct: 200 GIA-PFELLTSFDRPNIRYTVAEKLNAANQLRQFIQAQNGNSGIIYCSSRRRVDEVAERL 258

Query: 257 QSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRT 316
           + +G    AYHAG   + RA +QE F +D L IVVATVAFGMGINK NVRFVVH+DIP++
Sbjct: 259 RMQGYHADAYHAGKTQEERADIQERFLKDQLDIVVATVAFGMGINKSNVRFVVHYDIPKS 318

Query: 317 IESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQQDVERHKLNAMNAFAE 376
           +E+YYQETGRAGRDGL AEA +L+DPAD+  +R  +E++  G QQ VE HKLN M AFAE
Sbjct: 319 VEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQQEPGPQQQVEYHKLNTMAAFAE 378

Query: 377 AQTCRRLVLLNYFGEGKQNACGNCDVCLDPPKRYDGLLDAQKALSVVARVGQRFGLGYVV 436
           AQTCRR VLL+YF E     CGNCD+CLDPPKRYDG+ DAQK LS + R+ Q+FG+ +++
Sbjct: 379 AQTCRRQVLLHYFDESASEPCGNCDICLDPPKRYDGVEDAQKVLSCIFRLQQKFGVNHLI 438

Query: 437 EVLRGSNNQRIREYGHDKLTVYGIGKEHSNEHWTSVVRQLIHLGLITQNIAMHSALQLTE 496
           EVLRGS    + + GHDKL+ +GIGKE S+E W S++RQ+IHLG  +Q+I   SA++L  
Sbjct: 439 EVLRGSKAASVVDRGHDKLSTWGIGKEKSHEFWLSIIRQIIHLGFASQDITRGSAIKLNP 498

Query: 497 SARPVLRGEIPLQLAVPRIQ-TLKIKSSASQKTYGGNYDRKLFAKLRKLRKSLADDNNVP 555
            AR VL+GE+PLQLA PRI  T  +K  +S +    NYDRKLFA+L++LR+SLA++ +VP
Sbjct: 499 QARAVLKGELPLQLAEPRISITTHVKRRSSSRA-PINYDRKLFARLKQLRRSLAEELDVP 557

Query: 556 PYVVFNDTTLLEMAEHLPVSASDLLDITGVGQRKLEKFGRPFMAMIRDHI 605
           PY+VFND TL EMA  LP S  ++L + GVG+ KL +FG  F+  I D++
Sbjct: 558 PYLVFNDATLAEMAAMLPTSPGEMLAVNGVGETKLNRFGGEFLDEINDYL 607