Pairwise Alignments

Query, 720 a.a., DNA helicase II from Rahnella sp. WP5

Subject, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

 Score = 1016 bits (2626), Expect = 0.0
 Identities = 500/723 (69%), Positives = 598/723 (82%), Gaps = 4/723 (0%)

Query: 1   MDVSDLLDSLNEKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLAVEKCSPYSIMAV 60
           +D S LLD LN+KQREAVAAP  NLL+LAGAGSGKTRVLVHRIAWL++VE+ SP+S+MAV
Sbjct: 2   IDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAV 61

Query: 61  TFTNKAAAEMRHRIDQLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSDDQI 120
           TFTNKAAAEMR RI++L+  +  GMW GTFHG+ HR+LRAH+LDA L +DFQI+DSDDQ 
Sbjct: 62  TFTNKAAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQ 121

Query: 121 RLIKRLIKALNIDDKQWPPRQAMWYINGKKDEGLRPQHVETYNNPVEATWLRIYQAYQEA 180
           RL+KRLIKA N+DDKQWP RQ  W+IN +KDEGLRP H+  ++ PV  T+L++Y AYQEA
Sbjct: 122 RLLKRLIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAFD-PVTQTYLKLYTAYQEA 180

Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNLMVDEFQDTNSIQYAWIRLLAGDN 240
           CDRAGLVDFAE+LLRA EL     HI +HY+ RF +++VDEFQDTN+IQYAW+R++AG  
Sbjct: 181 CDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQ 240

Query: 241 NNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPNAQTIRLEQNYRSTSTILKAANSLIENN 300
           +NVMIVGDDDQSIYGWRGA+VENI++F ++FP+  TIRLEQNYRST TIL+A+N+LI NN
Sbjct: 241 SNVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANN 300

Query: 301 NGRMGKNLWTEDGEGEPISLYCAFNELDESRFVVNRIKTWQDNGGALKDCAILYRSNAQS 360
           + RMGK LWT+   GEPIS+Y A+NELDE+RFVV++IK WQ+ GG L DCAILYR+NAQS
Sbjct: 301 SERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQS 360

Query: 361 RVLEEALLQMAMPYRIYGGQRFFDRQEIKDALAYLRLMSNRNDDAAFERVVNTPTRGIGD 420
           RVLEEALLQ ++ YRIYGG RFF+RQEIKDAL+YLRL++NRNDD AFERV+NTP RG+GD
Sbjct: 361 RVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGD 420

Query: 421 RTLDVVRQTARDRQMTMWQATRALLQEKVLAGRAASSLQRFTELVDALAHETSDMPLHVQ 480
           +TL+ +R  ARDR  T+W A+  LL ++VL GRAAS+L RF EL++AL  E  DMPLHV 
Sbjct: 421 KTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVL 480

Query: 481 TDRVIKDSGLFIMYEQEKGEKGQARIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL 540
           TD  +K SGL  MY+QEKGEK +ARIENLEELVTATRQF   +E +++  L AFL+HAAL
Sbjct: 481 TDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAAL 540

Query: 541 EAGEGQADANQDATQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLEEGGRLEEERRLAY 600
           EAGEGQAD + DA QLMTLHSAKGLEFP VF+VG+EEGMFPSQMS EE GRLEEERRL Y
Sbjct: 541 EAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY 600

Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVSHRPSRFVGELPEDCVEEVRMRASVSRPMSN---R 657
           VG+TRAMQKL +TYAE RRLYG++  H+PSRF+ ELPE C++EVRM+A VSRP S     
Sbjct: 601 VGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMKAQVSRPTSTGRFS 660

Query: 658 SVGTPTSVSDTGFKLGQRVVHPKFGEGTIVNMEGSGEHSRLQVAFPGEGIKWLVAAYARL 717
                 S ++TGF LG RV HPKFGEGTI+N EGSG  SR+QVAF GEGIKWLV AYARL
Sbjct: 661 QTVVKESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYARL 720

Query: 718 EAV 720
           E V
Sbjct: 721 EKV 723