Pairwise Alignments

Query, 720 a.a., DNA helicase II from Rahnella sp. WP5

Subject, 721 a.a., UvrD/REP helicase from Marinobacter adhaerens HP15

 Score =  852 bits (2200), Expect = 0.0
 Identities = 419/726 (57%), Positives = 550/726 (75%), Gaps = 13/726 (1%)

Query: 1   MDVSDLLDSLNEKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLAVEKCSPYSIMAV 60
           MDVS ++D LN+ QREAV A   +LLVLAGAGSGKTRVLVHRIAWL+ V++  P  I+AV
Sbjct: 1   MDVSHIIDPLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRIAWLMTVDRVPPTGILAV 60

Query: 61  TFTNKAAAEMRHRIDQLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSDDQI 120
           TFTNKAA EMR+RI+Q++     G+W GTFHG+AHRLLR+H  DA LP++FQ+LDSDDQ+
Sbjct: 61  TFTNKAAKEMRYRIEQMMDIPARGLWFGTFHGIAHRLLRSHWKDAGLPENFQVLDSDDQL 120

Query: 121 RLIKRLIKALNIDDKQWPPRQAMWYINGKKDEGLRPQHVETYNNPVE---ATWLRIYQAY 177
           RLIKR+++   ID+ +WPP+QA W+I+ +KDEGLR  H++   NP +   +  L+IY+ Y
Sbjct: 121 RLIKRVMRENQIDESKWPPKQAQWFISSQKDEGLRVDHIQ--ENPGDHFLSIMLKIYRQY 178

Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNLMVDEFQDTNSIQYAWIRLLA 237
           ++ C + GLVDF ELLLR+HELWL++P +L HY+ RF +++VDEFQDTN+IQYAW+++LA
Sbjct: 179 EKLCQQGGLVDFGELLLRSHELWLHRPELLAHYQSRFQHILVDEFQDTNTIQYAWLQVLA 238

Query: 238 GDNNNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPNAQTIRLEQNYRSTSTILKAANSLI 297
            +   + +VGDDDQSIYGWRGA+VENIQ++ +DFPNA+ +RLEQNYRST  ILKAAN++I
Sbjct: 239 SNRVPMTVVGDDDQSIYGWRGAKVENIQQYQRDFPNARLVRLEQNYRSTQMILKAANAVI 298

Query: 298 ENNNGRMGKNLWTEDGEGEPISLYCAFNELDESRFVVNRIKTWQDNGGALKDCAILYRSN 357
            NN GR+GK LWT+  EGEPISLY AFNE DE+ ++ + I  W  +G    + AILYRSN
Sbjct: 299 ANNQGRLGKELWTDGPEGEPISLYAAFNEQDEANYIADSISAWVQDGNLRSESAILYRSN 358

Query: 358 AQSRVLEEALLQMAMPYRIYGGQRFFDRQEIKDALAYLRLMSNRNDDAAFERVVNTPTRG 417
           AQSRVLEE+L++  +PYR+YGG RF+DRQEI++ALAYLRL+  R DDAAFERVVN P RG
Sbjct: 359 AQSRVLEESLMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVQYRRDDAAFERVVNVPPRG 418

Query: 418 IGDRTLDVVRQTARDRQMTMWQATRALLQEKVLAGRAASSLQRFTELVDALAHETSDMPL 477
           IG ++L  +R+ A ++ +++W++   LL    + GRA + LQ F  +++ L+    D  L
Sbjct: 419 IGAKSLAELREYATEQSISLWESAERLLDAGQVKGRAKTGLQSFIAIIEGLSEMVGDASL 478

Query: 478 HVQTDRVIKDSGLFIMYEQEKGEKGQARIENLEELVTATRQFSYQDEDEDLMPLQAFLSH 537
           H    + I++SGL   +  EKGEKGQAR+ENLEELV A   +  +D    +  L  F++ 
Sbjct: 479 HGLMKQTIENSGLKDYHASEKGEKGQARVENLEELVNALSDYEVED---GVDALSEFIAQ 535

Query: 538 AALEAGEGQADANQDATQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLEEGGRLEEERR 597
           AAL+AGE QA  ++D+ QLMTLHSAKGLEFP VF+ G+EEG+FP  MSLEE GR+EEERR
Sbjct: 536 AALDAGESQAGDHEDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHGMSLEEPGRMEEERR 595

Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVSHRPSRFVGELPEDCVEEVRMRASVSRP---- 653
           LAYVG+TRAM+KL LTYAE+RRLYG+E  +  SRFV E+P DC++EVR+R +V+RP    
Sbjct: 596 LAYVGITRAMKKLVLTYAESRRLYGQEKFNALSRFVREIPGDCLQEVRLRNTVTRPAMVE 655

Query: 654 MSNRSVGTPTSVSDTGFKLGQRVVHPKFGEGTIVNMEGSGEHSRLQVAFPGEGIKWLVAA 713
             N S+ +  S   +GF LGQRV HPKFGEG ++N EG+G H+R+QV F  EG KWLV A
Sbjct: 656 RPNESMFSQDSAQQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNF-DEGAKWLVLA 714

Query: 714 YARLEA 719
           YA LEA
Sbjct: 715 YAPLEA 720