Pairwise Alignments

Query, 308 a.a., high-affinity branched-chain amino acid ABC transporter permease LivH from Rahnella sp. WP5

Subject, 300 a.a., high-affinity branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  296 bits (759), Expect = 3e-85
 Identities = 151/304 (49%), Positives = 216/304 (71%), Gaps = 8/304 (2%)

Query: 7   YFIQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAAL--MMM 64
           YF+QQ+ NG+TLGS Y +IAIGYTMVYGIIGMINFAHG+++M+G + + IV   L   + 
Sbjct: 3   YFVQQLVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLLLTTFIA 62

Query: 65  GIDASWLLIGAGFIAAIVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSL 124
           G+     L+    +  ++ ++ + W+IERVAY+P+R S RL  LI+AIGMSI L N++ +
Sbjct: 63  GVPVVLALL-IMMVVGMLTAALWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQV 121

Query: 125 TQGSRDLALPSLVTGQWKLGETNGFAATISTMQLIIWVVTFVAMLALTLFIRYSRMGRAC 184
           TQG R+  +P LV+  + L     F  ++S  Q+II V+T + +      +  + +GRA 
Sbjct: 122 TQGPRNKPIPPLVSSVYDL-----FGISVSLKQIIIVVITAILLSVFWYIVNRTPLGRAQ 176

Query: 185 RACAEDLKMASLLGISTDRVISLTFVIGALMAAVAGVLLGQFYGVINPYIGFMAGMKAFT 244
           RA  +D KMA+LLG+  DR IS+TF++GA +AAVAG +   +YGV+    GF  G+KAFT
Sbjct: 177 RATEQDRKMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTDGFAPGVKAFT 236

Query: 245 AAVLGGIGSIPGAMIGGLILGVAEALTSAYLSTEYKDVVSFALLIVVLLVLPTGILGRPE 304
           AAVLGGIGS+PGA++GGL++G+ E+L SAY + +YKDV +F++L +VL+  P+GILGRPE
Sbjct: 237 AAVLGGIGSLPGAVLGGLLIGLIESLWSAYFTIDYKDVATFSILAIVLIFKPSGILGRPE 296

Query: 305 VEKV 308
           VEKV
Sbjct: 297 VEKV 300