Pairwise Alignments

Query, 308 a.a., high-affinity branched-chain amino acid ABC transporter permease LivH from Rahnella sp. WP5

Subject, 302 a.a., high-affinity branched-chain amino acid ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  314 bits (805), Expect = 1e-90
 Identities = 164/302 (54%), Positives = 222/302 (73%), Gaps = 4/302 (1%)

Query: 7   YFIQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGI 66
           YF + +F G+T GS YALIA+GYTMVYGII +INFAHGEVYMIG++ + IV   L + G 
Sbjct: 5   YFCELLFGGLTRGSIYALIALGYTMVYGIIELINFAHGEVYMIGAFTALIVAGVLGIYGF 64

Query: 67  DASWLLIGAGFIAAIVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQ 126
             + +LI A  I A++  +AYG+++E+VAYKP+R++ RL  LISAIGMSIFLQNYV L Q
Sbjct: 65  PEAGILIIAA-IVAVIYCAAYGFTLEKVAYKPLRDAPRLSPLISAIGMSIFLQNYVILAQ 123

Query: 127 GSRDLALPSLVTGQWKLGETNGFAATISTMQLIIWVVTFVAMLALTLFIRYSRMGRACRA 186
            S  +  P LV     L      A    T  ++I V + + M+ LTLFI+Y+RMG+A RA
Sbjct: 124 TSDFVPFPRLVPD---LAILEPIAHITGTSDVLIIVTSAITMVGLTLFIKYTRMGKAMRA 180

Query: 187 CAEDLKMASLLGISTDRVISLTFVIGALMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAA 246
            A++ KMA LLGI  DRVISLTF+IG+ +AA+ GVL+    G +N  IGF+AG+KAFTAA
Sbjct: 181 TAQNRKMAMLLGIDADRVISLTFIIGSSLAAIGGVLIASHIGQVNFAIGFIAGIKAFTAA 240

Query: 247 VLGGIGSIPGAMIGGLILGVAEALTSAYLSTEYKDVVSFALLIVVLLVLPTGILGRPEVE 306
           VLGGIGSIPGAM GGL+LG+ E+  + Y+S++Y+D ++FALL+++L+  P+GILG+P+ +
Sbjct: 241 VLGGIGSIPGAMAGGLVLGLCESFATGYVSSDYEDALAFALLVLILIFRPSGILGKPKTQ 300

Query: 307 KV 308
           KV
Sbjct: 301 KV 302