Pairwise Alignments

Query, 731 a.a., primosomal protein N' from Rahnella sp. WP5

Subject, 740 a.a., primosomal protein N' from Pseudomonas stutzeri RCH2

 Score =  694 bits (1791), Expect = 0.0
 Identities = 364/736 (49%), Positives = 486/736 (66%), Gaps = 10/736 (1%)

Query: 3   VAHVALPVPLARTFDYLLPPDMQ---VSKGCRVSVPFGKRDAIGIVTQVSDFSEFGLEKL 59
           +  +ALP PL R FDYL P  +    +  G R+ VPFG+R+ +GI+ ++SD SE  +EKL
Sbjct: 5   ILRLALPSPLRRLFDYLPPAGVSRAALQPGVRLRVPFGRREVVGILVELSDQSEVPVEKL 64

Query: 60  KPVREVLDSSSLFTPDLWRILFWAADYYHYPIGEVLFHALPVLLRQGKAAELTPLWQWFA 119
           KP  E+LD+       L+++  W A YY + +G+ L  ALPVLLRQG+ AE      W  
Sbjct: 65  KPALELLDAKPPLPAPLFKLCLWTAQYYQHSLGDTLSWALPVLLRQGEPAEARQERYWRL 124

Query: 120 TEEGRATPLDS-LKRAPKQQQAMAALMQKP--LYRHQVADLDLTDTALQALRAKGLTDLR 176
            E   A+P D  L RAPKQ++A+ A+ Q    L    ++ L L   +L  L  KGL  + 
Sbjct: 125 AEG--ASPEDPRLARAPKQREALKAIAQHAHGLPHALLSKLQLNKDSLDLLLEKGLVHIE 182

Query: 177 SIAPATHDWRQDFSVIGERLRLNTEQATAVGAIRSEDQQFSAWLLAGVTGSGKTEVYLSV 236
           S             ++   L LN +Q  A  A+ +    F A+LLAGVTGSGKTEVYL +
Sbjct: 183 SRRSKPSRGHSGSWLLQAELTLNAQQRAAFEAVSAGLGGFQAFLLAGVTGSGKTEVYLQL 242

Query: 237 LENILAQGRQALVMVPEIGLTPQTIARFRERFSAPVDVLHSGLNDSERLAVWLRARNGEA 296
           +  +L  G+QALV++PEI L PQT+ARF +RF+A + +LHS +ND +RL  WL AR+GEA
Sbjct: 243 IHRVLEAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSNVNDRDRLDAWLAARDGEA 302

Query: 297 GIVIGTRSSLFTPFARLGVIIIDEEHDSSYKQQEGWRYHARDLAVYRAHAENIPIIMGSA 356
            I+IGTRS+LFTP    G+IIIDEEHD+SYKQQEG RYHARDLA+ RA  EN+PI++GSA
Sbjct: 303 DIIIGTRSALFTPMKNPGLIIIDEEHDASYKQQEGLRYHARDLALVRARQENLPIVLGSA 362

Query: 357 TPALETLHNVELGKYRQLKLTKRAGNAKLARQNLLDLKGLQLKVGLSQPLIQKMQEHLKA 416
           TP+LE+LHN   G+Y  LKLT+RAGNA+  R   LD+K   L  G+S PL Q + + L A
Sbjct: 363 TPSLESLHNAHSGRYALLKLTQRAGNAQSPRFLRLDVKSRPLDAGISGPLQQAIGQTLAA 422

Query: 417 DNQVMLFLNRRGYAPALLCHECGWIAECQRCDHYYTLHQNQRQLRCHHCDSQRAVPHQCP 476
             QV+++LNRRG+AP LLCH+CGW+++C RCD   TLHQ   +LRCHHC      P  CP
Sbjct: 423 GQQVLIYLNRRGFAPTLLCHDCGWLSQCPRCDARMTLHQRHNELRCHHCGHVERPPRNCP 482

Query: 477 HCGSTQLVSVGVGTEQLENELAPLFPDTPITRIDRDTTSRKGSLEQHLNEVHRGGARILI 536
            CG   L  VG GTE+ E  L  LFPD P+ RIDRD+T+RKG++EQ +  ++RG   +L+
Sbjct: 483 DCGKVDLRPVGAGTERAEERLGILFPDYPVLRIDRDSTARKGAMEQMIGTINRGEPCLLV 542

Query: 537 GTQMLAKGHHFPDVTLVSLLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVLQ 596
           GTQMLAKGHHFP VTLV++LD DG LFSADFR++ER AQL  QV+GRAGRA + G+V++Q
Sbjct: 543 GTQMLAKGHHFPRVTLVAILDADGGLFSADFRASERMAQLIVQVAGRAGRAEEPGKVIIQ 602

Query: 597 THHPEHPLLQVLLQQGYDEFARQTLAERKSVFLPPYTSHIMIRSEDHDNQQSALFLQQLR 656
           TH  +HPLL  L +QGY  FA Q L+ER++  LPP++   ++R+E     Q+  FL    
Sbjct: 603 THLADHPLLVQLTEQGYFAFAEQALSERRAAGLPPFSHLALLRAEAQKPGQAEAFLDDAC 662

Query: 657 NLLES--SPLKDDSLWILGPVPALQAKRSGRFRWQLLLQHPSRRVLQHLIKSSQPLISSL 714
           +L E     L+ + + +LGPVPA   +R+GR+R QLLLQ  +R  L  L+    P +  L
Sbjct: 663 SLAEQLLEQLQLNGVELLGPVPAPMERRAGRYRAQLLLQGNARATLHRLMDIWTPTLEQL 722

Query: 715 PQAKKVKWTLDVDPID 730
           P ++ V+W+LDVDPID
Sbjct: 723 PGSRAVRWSLDVDPID 738