Pairwise Alignments

Query, 731 a.a., primosomal protein N' from Rahnella sp. WP5

Subject, 811 a.a., Primosomal protein n (NCBI) from Rhodospirillum rubrum S1H

 Score =  313 bits (803), Expect = 2e-89
 Identities = 260/799 (32%), Positives = 366/799 (45%), Gaps = 84/799 (10%)

Query: 2   PVAHVALPVPLARTFDYLLPPDM-QVSKGCRVSVPFGKRDAIGIVTQVSDFSEFGLEKLK 60
           PV  V LP+PLA  +DY +P  M + + G  V VP G+R+ IG+V       E   E+LK
Sbjct: 23  PVVAVLLPLPLAGAYDYKVPAGMARPAVGTLVRVPLGRREEIGVVWGAGA-GETPPERLK 81

Query: 61  PVREVLDSSSLFTPDLWRILFWAADYYHYPIGEVLFHALPVLLRQGKAAELTPLWQWFAT 120
           P+    +   L  P L   + W A Y   P G VL  AL V           P   W   
Sbjct: 82  PLIGFPECPPLPAP-LRAFIDWVAAYTVQPPGAVLRMALSV---PAALEAPPPALGWRRP 137

Query: 121 EEGRAT---------PLDSLKR-APKQQQAMAALMQKPLYRHQVADLD----LTDTALQA 166
             G+           PL    R +P +Q+ +A L   P      ADL     +    + A
Sbjct: 138 SAGQRAAGQRAEGQGPLPGGARLSPGRQRVLAVLDDHPGLPFAGADLAREAAVGPAVVAA 197

Query: 167 LRAKGLTDLRSIAPATHDWRQDFSVIGERLRLNTEQATAVGAIRSEDQQFSAWLLAGVTG 226
           +   GL +  + +        D    G  L  + +QA A G   + DQ FS  LL GVTG
Sbjct: 198 MAKAGLLEAVTRSNEWSPQAPDADRPGPLLSAD-QQAAADGLRTALDQGFSGLLLEGVTG 256

Query: 227 SGKTEVYLSVLENILAQGRQALVMVPEIGLTPQTIARFRERFSAPVDVLHSGLNDSERLA 286
           SGKTEVY   +   L +GRQALV++PEI L  Q   RF +RF A     HS +  + R  
Sbjct: 257 SGKTEVYFEAIAETLRRGRQALVLLPEIALAAQWPRRFADRFGAAPVQWHSQMGAAARRR 316

Query: 287 VWLRARNGEAGIVIGTRSSLFTPFARLGVIIIDEEHDSSYKQQEGWRYHARDLAVYRAHA 346
            W     G A +V+G RS+LF P+  LG+II+DEEHDS++KQ+EG  Y+ARD+AV RA  
Sbjct: 317 AWRAVALGRAPVVVGARSALFLPYPDLGLIIVDEEHDSAFKQEEGVPYNARDMAVVRARL 376

Query: 347 ENIPIIMGSATPALETLHNVELGKYRQLKLTKRAGNAKLARQNLLDLK------------ 394
              P ++ SATP+LET+ N   G+YR L L +R G A++    LLDL+            
Sbjct: 377 GGFPAVLASATPSLETIENARQGRYRHLVLPRRHGGAEMPEITLLDLRRAPPQKWLPTDF 436

Query: 395 -GLQLKVGLSQP-LIQKMQEHLKADNQVMLFLNRRGYAPALLCH--ECGWIA-------- 442
            G     GL+ P       E  KA             +P+ +      GW++        
Sbjct: 437 AGPGGSEGLAAPGGANDEAEEQKAPPPSPTASPSPTASPSPMARPARLGWLSPPLITAVE 496

Query: 443 ECQRCDHYYTLHQNQR-------------QLRCHHC-----DSQRAVPHQCPHCGSTQ-- 482
           E         L  N+R             +L+C  C     + +R    +C HCG  Q  
Sbjct: 497 ETLAAGEQVLLFLNRRGYAPLTLCRSCGHRLKCPRCTAWLVEHRRDGRLRCHHCGYQQPI 556

Query: 483 ------------LVSVGVGTEQLENELAPLFPDTPITRIDRDTTSRKGSLEQHLNEVHRG 530
                       L   G G E+L  E A  FP   +     DT +           +   
Sbjct: 557 PETCPACGVADSLAPCGPGVERLAEEAAHRFPKARMDVAASDTVTGPKEAAALATRIANH 616

Query: 531 GARILIGTQMLAKGHHFPDVTLVSLLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQ 590
              ++IGTQ++AKGHHFP +TLV ++D D  L   D R++ER  QL  QV+GRAGRA + 
Sbjct: 617 DIDLIIGTQIMAKGHHFPLITLVGVVDGDLGLTGGDLRASERTHQLLHQVAGRAGRAERP 676

Query: 591 GEVVLQTHHPEHPLLQVLLQQGYDEFARQTLAERKSVFLPPYTSHIMIRSEDHDNQQSAL 650
           G V++QT  P HP+++ L       F     AER+++ +PP+   + +     D+ +   
Sbjct: 677 GRVLIQTVDPGHPVMEALASGDPALFLEVEAAERQALAMPPFGRLVALVISGEDSAR--- 733

Query: 651 FLQQLRNLLESSPLKDDSLWILGPVPALQAKRSGRFRWQLLLQHPSRRVLQHLIKSSQPL 710
            +Q +   L  +      L +LGPVPA  A   GR R +LLL+      +Q +++    L
Sbjct: 734 -VQAVAAALGRAAPMGPGLDVLGPVPAPLAMLRGRHRHRLLLKAARGVKVQPVVRHWLSL 792

Query: 711 ISSLPQAKKVKWTLDVDPI 729
           +S  P    VK  +DVDPI
Sbjct: 793 VSIPP---GVKVQVDVDPI 808