Pairwise Alignments

Query, 307 a.a., DNA-binding transcriptional regulator OxyR from Rahnella sp. WP5

Subject, 301 a.a., hydrogen peroxide-inducible genes activator from Vibrio cholerae E7946 ATCC 55056

 Score =  172 bits (437), Expect = 7e-48
 Identities = 108/295 (36%), Positives = 162/295 (54%), Gaps = 6/295 (2%)

Query: 2   NIRDLEYLVALAEFRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRK--VLFTQ 59
           +++ L YLV L E RHF  AA+ C VSQ TLS  I+ LE+ +G  L E+  +K  ++FT+
Sbjct: 6   SLKQLSYLVTLYETRHFSEAAERCFVSQSTLSKGIQNLEELIGCSLYEKQDKKSPLVFTR 65

Query: 60  AGLLLVDQARTVLREVKVLKEMASQ-QGEAMSGPMHIGLIPTVGPYLLPQIIPSLHKTFP 118
            G L+V Q R +L + + L E+    QG+ M G + +G IPT+ P+LL  ++  +++ +P
Sbjct: 66  VGELVVKQGRELLAKGQDLVELGKLCQGDTMEGQLRLGCIPTIAPFLLCDLVQEINQRYP 125

Query: 119 KLEMYLHEAQTHQLLAQLDSGKLDCAILALVKESEAFIEVPLFDEPMRLAIYDDHPWASR 178
           KL + L E  T  LL+ L SG+LD  ILAL  +        +  +P R+ I  +     R
Sbjct: 126 KLHLLLREDTTANLLSALRSGELDVLILALPVDIGNMESYVVGQDPFRMVISRNQVNQIR 185

Query: 179 DRVAMADLAGEKLLMLEDGHCLRDQALGFCFQAGADEDTHFRATSLETLRNMVAAGSGIT 238
             +  ADL  E + +LE+ HCL + A+  C     ++   F ATSL TL  MVA G G T
Sbjct: 186 VPIRYADLPDESVFLLENEHCLTEHAVSACKLTDKEKINPFTATSLHTLVQMVANGLGTT 245

Query: 239 LLPSLAVPNERSRDGVTYLMCDKPEPR--RTIALVYRPGSPLRGRYEQLAEAIKE 291
            +P +A+ +    D    ++ D P  +  R I LV+RP S     + QLAE + E
Sbjct: 246 FIPQMAI-DHGLLDNQNLVVIDPPGQKAYREIGLVWRPSSSRIHTFRQLAEIVAE 299