Pairwise Alignments

Query, 307 a.a., DNA-binding transcriptional regulator OxyR from Rahnella sp. WP5

Subject, 320 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  221 bits (563), Expect = 2e-62
 Identities = 123/289 (42%), Positives = 182/289 (62%), Gaps = 2/289 (0%)

Query: 3   IRDLEYLVALAEFRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRK-VLFTQAG 61
           +R L YLV ++E RHF RAA+ C V+Q TLS  +++LE  LG  L+ER SR+ V+FT  G
Sbjct: 7   LRQLRYLVTVSETRHFGRAAEICAVTQSTLSAGVQELEGLLGTRLIERRSRRQVVFTPLG 66

Query: 62  LLLVDQARTVLREVKVLKEMASQQGEAMSGPMHIGLIPTVGPYLLPQIIPSLHKTFPKLE 121
             +V++AR VL + + L + A      + G +H+G+IPT+GPY+LP+++P+L + +  L 
Sbjct: 67  EEIVERARAVLADAEALVDAAQAGSLPLVGDLHLGVIPTIGPYVLPRLVPALREAYGGLR 126

Query: 122 MYLHEAQTHQLLAQLDSGKLDCAILALVKESEAFIEVPLFDEPMRLAIYDDHPWASRDRV 181
           ++L E Q+  LL+ L++G++D A++AL         V L  E + LA+ ++HP A+ D +
Sbjct: 127 LFLREEQSANLLSLLNAGRIDAALMALPYAVGDLPRVELATEEVVLAMPENHPLAAFDDI 186

Query: 182 AMADLAGEKLLMLEDGHCLRDQALGFCFQAGADEDTHFRATSLETLRNMVAAGSGITLLP 241
           A+  L  E +LMLEDGHCLR+ A+  C    +  +  F+ATSL TL  MVA G G+TL+P
Sbjct: 187 AVEKLESETMLMLEDGHCLREHAMEACHLTRSRGNEAFQATSLSTLVQMVAGGVGVTLMP 246

Query: 242 SLAVPNE-RSRDGVTYLMCDKPEPRRTIALVYRPGSPLRGRYEQLAEAI 289
           S+AVP E R   GV           RT+AL++RP SP    Y  LA+AI
Sbjct: 247 SIAVPVEARPGSGVVVRPITGARAARTLALLWRPASPRSRDYRLLADAI 295