Pairwise Alignments

Query, 341 a.a., HTH-type transcriptional repressor PurR from Rahnella sp. WP5

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  200 bits (509), Expect = 4e-56
 Identities = 114/332 (34%), Positives = 189/332 (56%), Gaps = 2/332 (0%)

Query: 1   MATIKDVAKRAGVSTTTVSHVINKTRFVAEETKEAVLLAIKELHYSPSAVARSLKVNNTK 60
           MAT+KDVA+ AGVST TVS  +     V+  T++ V  A+ E  YSP+++AR+L+ N +K
Sbjct: 1   MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESK 60

Query: 61  TIGLLATSSEAPYFAEVIEAVENSCFSKGYTLILCNSHNNLEKQQAYLQMLAQKRVDGLL 120
           TI  +      PYF+E+I  +E++    GY ++L +S     ++ +++ ++  K+ DG+L
Sbjct: 61  TIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGML 120

Query: 121 VMCAEYPDELLNMLEEHRSIPMVVMDWGEARKNFTDSIIDNAFEGGYMAGRYLIERGHRD 180
           ++  + P ++     E +++P +VM    A +    ++  +     + A  YL + GH+ 
Sbjct: 121 LLGTDLPFDVSK--PEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKR 178

Query: 181 IGVIPGQLARNTGGGRFQGFVKALTEANIPLRDEWVVQGDFEPESGYQAMHKILMQKHRP 240
           I  I G         R QG+ +AL  A I +   +   GDF  E+G +A+ ++L    +P
Sbjct: 179 IAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQP 238

Query: 241 TAVFCGGDVMAMGAICAADELGLRVPQDISVIGYDNVRNARYFSPALTTVHQPKERLGEM 300
           TA+FC  D MA+GAI  A  LGLRVPQD+SV+G+D+++ A+Y  P LTT+ QP+  +G  
Sbjct: 239 TAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQ 298

Query: 301 AFTMLLDRIVSKREESQTIEVHPKLVERRSVA 332
           A  M+L+ +      + +  +  KLV R S A
Sbjct: 299 AMLMMLELLRGHDVRAGSRLLETKLVVRESAA 330