Pairwise Alignments

Query, 335 a.a., Holliday junction branch migration DNA helicase RuvB from Rahnella sp. WP5

Subject, 346 a.a., Holliday junction DNA helicase RuvB from Sinorhizobium meliloti 1021

 Score =  401 bits (1030), Expect = e-116
 Identities = 203/330 (61%), Positives = 254/330 (76%), Gaps = 2/330 (0%)

Query: 1   MIEADRLISSEVFSEEEVIDRAIRPKLLSEYVGQPHVRSQMEIFIQAAKQRKDALDHLLI 60
           M EA RLI+ E   E+  +D  +RP+ L E+ GQ   R+ ++IFI+AA+ R +ALDH+L 
Sbjct: 1   MSEAARLIAPEKRGED--LDATMRPQTLDEFTGQAEARANLKIFIEAARNRGEALDHVLF 58

Query: 61  FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP 120
            GPPGLGKTTLA I+A E+GVN R+TSGPV+ KAGDLAA+LTNLE  DVLFIDEIHRL+P
Sbjct: 59  VGPPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNP 118

Query: 121 VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR 180
            VEEILYPAMED+QLD++IGEGPAARS+K+DL  FTL+ ATTR G LT+PLRDRFGI  R
Sbjct: 119 AVEEILYPAMEDFQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPVR 178

Query: 181 LEFYQVADLQHIVGRSASCLGLELSEEGAHQIARRSRGTPRIANRLLRRVRDFAEVKGDG 240
           L FY V +L+ IV R A  +GL +++EGA +IARR+RGTPRIA RLLRRVRDFAEV    
Sbjct: 179 LNFYTVEELELIVRRGARLMGLGMTDEGAREIARRARGTPRIAGRLLRRVRDFAEVARAE 238

Query: 241 TINGDVANGALDMLDVDAEGFDYMDRKLLLAIIDKFSGGPVGLDNLAAAIGEERETIEDV 300
            +   +A+ AL  L VD+ G D +DR+ L  I   F GGPVG++ +AA + E R+ IED+
Sbjct: 239 AVTLKIADEALTRLLVDSMGLDQLDRRYLTMIAQNFGGGPVGIETIAAGLSEPRDAIEDI 298

Query: 301 IEPFLIQQGFIQRTPRGRMATNHAYKHFGI 330
           IEP+LIQQGFIQRTPRGR+ T +A+KH G+
Sbjct: 299 IEPYLIQQGFIQRTPRGRVLTANAWKHLGL 328