Pairwise Alignments

Query, 335 a.a., Holliday junction branch migration DNA helicase RuvB from Rahnella sp. WP5

Subject, 350 a.a., Holliday junction DNA helicase RuvB (NCBI) from Rhodospirillum rubrum S1H

 Score =  416 bits (1068), Expect = e-121
 Identities = 203/333 (60%), Positives = 261/333 (78%), Gaps = 2/333 (0%)

Query: 3   EADRLISSEVFSEEEVIDRAIRPKLLSEYVGQPHVRSQMEIFIQAAKQRKDALDHLLIFG 62
           E +RLIS      E  +D A+RP+ L+++VGQ   R  + +F+QAA+ R +A+DH+L  G
Sbjct: 7   EDERLISGR--RREGEVDAALRPQSLADFVGQRQTRENLGVFVQAARARGEAMDHVLFHG 64

Query: 63  PPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVV 122
           PPGLGKTTLA IVA E+GV  R TSGP++ KAGDLAA+LTNLEP DVLFIDEIHRL+P +
Sbjct: 65  PPGLGKTTLAQIVARELGVGFRGTSGPMIVKAGDLAAILTNLEPRDVLFIDEIHRLNPAI 124

Query: 123 EEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLE 182
           EE+LYPAMED+QLD++IGEGPAARS+++DLPPFTL+GATTR+G LT+PLRDRFGI  RL+
Sbjct: 125 EEVLYPAMEDFQLDLIIGEGPAARSVRIDLPPFTLVGATTRSGLLTTPLRDRFGIPLRLD 184

Query: 183 FYQVADLQHIVGRSASCLGLELSEEGAHQIARRSRGTPRIANRLLRRVRDFAEVKGDGTI 242
           FY+  +L  IV R +  LG+ L++EGA ++ARRSRGTPR+A RLLRRVRDFA V G   +
Sbjct: 185 FYETDELVQIVTRGSRLLGMALTDEGAREVARRSRGTPRVAGRLLRRVRDFAAVAGRSPV 244

Query: 243 NGDVANGALDMLDVDAEGFDYMDRKLLLAIIDKFSGGPVGLDNLAAAIGEERETIEDVIE 302
           +  +A+ AL+ L+VD  G D MDR+ L  + D + GGPVG+D LAAA+ EER+T+EDVIE
Sbjct: 245 DAFIADAALNRLEVDGRGLDAMDRRYLSRMADHYGGGPVGVDTLAAALAEERDTVEDVIE 304

Query: 303 PFLIQQGFIQRTPRGRMATNHAYKHFGIARESE 335
           P+LIQQGFI+RTPRGRM T  A+ H G+   +E
Sbjct: 305 PYLIQQGFIKRTPRGRMLTAIAWTHLGLTPPAE 337