Pairwise Alignments

Query, 367 a.a., flagellar motor protein MotB from Rahnella sp. WP5

Subject, 295 a.a., OmpA/MotB from Pseudomonas syringae pv. syringae B728a

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 89/305 (29%), Positives = 149/305 (48%), Gaps = 37/305 (12%)

Query: 27  WKIAYADFMTAMMAFFLVMWLISISSPKELVQIAEYFRTPLAVAITGGPRSSDAT-SPIP 85
           W ++YADF+T + AFF+VM+  SISS  E     +Y    L+ A+ G    ++ T  PIP
Sbjct: 16  WLVSYADFITLLFAFFVVMY--SISSVNE----GKY--KILSQALVGVFNDTERTMKPIP 67

Query: 86  GGGEDP-TVQDGE--VHKMEQSQGASKRESDD-LQRLQQKLE----DMLASDPRLKDLRP 137
            G + P +++  E  V   EQ+     + SDD LQ + Q +     D++ SD        
Sbjct: 68  IGEQRPVSIKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSD-------- 119

Query: 138 HLMINLTEQGLRIQI-IDSKNRPMFQLGSAIVEPYMRDILRAIAPVLDGFPNKISLAGHT 196
                +T +G  + I I+  +  +F  G A+       I+  +A ++  F N I + G T
Sbjct: 120 ----QMTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEGFT 175

Query: 197 DDMPYATGERGYSNWELSTERANASRREMMSGGLSEGKVLRVMGMGSSMQL--KNHPAGD 254
           DD P +T +   +NWELS+ R+ +  R +   G++  ++  V G G    +      AG 
Sbjct: 176 DDQPISTAQFP-TNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIVPNTSTAGR 233

Query: 255 AINRRISILVLNKHAEEAIERENSEGEAITISDAGELQRQVQGTQKVPALAPKMSSAPAA 314
           A NRR+ +LV++++ +  I R  +   +  +     L+R    T  VPA  P  ++A  +
Sbjct: 234 AKNRRV-VLVISRNLD--IRRSLTSAGSANVQPDAALRRAGTQTAPVPAKPPVRANAVNS 290

Query: 315 PALAP 319
           P+ AP
Sbjct: 291 PSPAP 295