Pairwise Alignments

Query, 367 a.a., flagellar motor protein MotB from Rahnella sp. WP5

Subject, 241 a.a., OmpA/MotB domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 19/239 (7%)

Query: 24  GGSWKIAYADFMTAMMAFFLVMWLISISSPKELVQIAEYFRTPLAVAITGGPRSSDATSP 83
           GGSWK+AYADF+TAMMAFFL+MW+++++ P+    +A YF T  ++       S  A +P
Sbjct: 4   GGSWKVAYADFVTAMMAFFLLMWILNMTPPETKQALAGYFSTERSL-FDSSNVSPVANNP 62

Query: 84  IPGGGEDPTVQDGEVHKMEQSQGASKRESDDLQRLQQKLEDMLASDPRLKDLRPHLMINL 143
              G +    +D +V + E+S  A          + QKL+ M+ +D   ++      I+ 
Sbjct: 63  FVQGVDKLDTRDFKVSETEKSHYA----------IAQKLKQMMMADAIPQNASG---ISA 109

Query: 144 TEQGLRIQIIDSKNRPMFQLGSAIVEPYMRDILRAIAPVLDGFPNKISLAGHTDDMPYAT 203
            + G+ +++    +  MF+ GSA + P    +L  +  +L  +   + + GH+D    A 
Sbjct: 110 DDVGVLLRV---NSDVMFKAGSAELVPEGSRVLDEVIKILREYNLYLMVRGHSDSGEVAA 166

Query: 204 GERGYSNWELSTERANASRREMMSGGLSEGKVLRVMGMGSS--MQLKNHPAGDAINRRI 260
           G    SNWELS  RA A+ R ++  G  +   LR +    +  M+    P   + NRR+
Sbjct: 167 GSPYPSNWELSGARAAAAVRYIIEHGGIKPTRLRGIAYADTRPMEPNTTPESRSKNRRV 225