Pairwise Alignments

Query, 414 a.a., flagellar hook protein FlgE from Rahnella sp. WP5

Subject, 396 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

 Score =  265 bits (676), Expect = 2e-75
 Identities = 168/417 (40%), Positives = 238/417 (57%), Gaps = 28/417 (6%)

Query: 1   MSFSQAVSGLSAASTNLDVIGNNIANSATVGFKTATASFADMFAGSQTGMGVKVAAVTQN 60
           MSF+ A++GLSA +  L+ IGNNIANS TVGFK++  +F  ++A +Q  MGV+V   TQ+
Sbjct: 1   MSFNIALTGLSAVNEQLNTIGNNIANSGTVGFKSSRTNFGSLYAETQA-MGVEVIGTTQS 59

Query: 61  FNDG-TTTNTSRGLDVALSGNGFFRLTDTSGAVYYSRNGQFSLDANRNLVNMQGLSVTGF 119
            + G   T+T+R LD+A+SG GFF    ++G V Y+R G F  D +  + N  G  + G+
Sbjct: 60  ISQGGALTSTNRTLDLAISGGGFFVTRASNGDVGYTRAGIFGTDKDSYITNSLGQRLQGY 119

Query: 120 PA--TGTPPTIAAGAQPVALNIPTTLMNAKATTVGTMVANLNSTDTAIPAAKTFSSSDDT 177
           PA  TG   T   G     L + +  + A+AT   + VANL++       A    ++D  
Sbjct: 120 PADATGNLQTGTVGD----LQLRSGGIPARATDALSFVANLDANQEVPTVAFDPLAAD-- 173

Query: 178 SYNYVNSITTYDSQGNAHDNNVYFVKTSANNWDV-YAQDGSVTGSTAGKIGAMQFDTSGA 236
           SYN   +   YDSQG  H    YFVKT+ NNW+  Y  DG+   + AG   A+ FDTSG 
Sbjct: 174 SYNSTYTTKLYDSQGKEHTLTQYFVKTADNNWNAHYYVDGA---ALAGAPQALTFDTSGV 230

Query: 237 LVSTTNAAGVANAGLALTLPMNTATNGTVTPQTVSLDFTGSIQQSTGSD-SIGSQTQDGY 295
           L +           +AL  P+     G V P  + LD++G+ Q   GS+ S+ +    GY
Sbjct: 231 LATPIGT-------VALAAPLT----GGVAPLAIQLDYSGTSQY--GSEFSVTNNRATGY 277

Query: 296 AAGQMTGYTINDDGTISGTYSNNKTQLLGQIVLSNFSNPEGLKSEGDNVWTATASSGQAV 355
           AAG+ TG ++  DG +  +YSN +  L GQ+VL++F N EGLK+     WT TA+SG A+
Sbjct: 278 AAGEQTGMSVEKDGKVYASYSNGERMLQGQVVLASFVNAEGLKNISGTAWTETAASGAAM 337

Query: 356 TGIAGQGGLASMTSGALESSNVDLSAELVNMIVAQRNYQSNAQTIKTQDSILNTLVN 412
            G  G G   ++ SGALESSNVDL+ +LV ++  QRNYQ+N Q I T   +   L N
Sbjct: 338 LGAPGVGQYGTLASGALESSNVDLTQQLVGLMEGQRNYQANTQVISTNKELTQVLFN 394