Pairwise Alignments

Query, 414 a.a., flagellar hook protein FlgE from Rahnella sp. WP5

Subject, 434 a.a., flagellar hook protein FlgE from Vibrio cholerae E7946 ATCC 55056

 Score =  194 bits (493), Expect = 4e-54
 Identities = 138/441 (31%), Positives = 215/441 (48%), Gaps = 43/441 (9%)

Query: 6   AVSGLSAASTNLDVIGNNIANSATVGFKTATASFADMFAGS-------QTGMGVKVAAVT 58
           ++SGLSAA  +L+   NNIAN+ T GFK + A F D+++ S         G GV+ A V 
Sbjct: 5   SLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAKVA 64

Query: 59  QNFNDGTTTNTSRGLDVALSGNGFF-----RLTDTSGAVYYSRNGQFSLDANRNLVNMQG 113
           Q F++G++  T+  LD+ ++G GFF     RL      +  +RNG F LD N  +V    
Sbjct: 65  QQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNEL--TRNGAFHLDKNSFMVTAND 122

Query: 114 LSVTGF---PATGTPPTIAAGAQPVALNIPTTLMNAKATTVGTMVANLNST-DTAIPAAK 169
             + G+   P TG         +P  +NIP      K T    + ANL +  D   PA  
Sbjct: 123 EFLLGYEVNPDTGD----VLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPAL- 177

Query: 170 TFSSSDDTSYNYVNSITTYDSQGNAHDNNVYFVK--TSANNWDVYAQDGSVTG------- 220
            F  +D  +YN   S T YDS G  +    Y++K    AN W  Y      TG       
Sbjct: 178 -FDITDPETYNRTTSSTIYDSMGQPYKLTTYYLKDMNQANTWQTYYTVTDKTGEKPINVV 236

Query: 221 -----STAGKIG-AMQFDTSGALVSTTNAAGVANAGLALTL-PMNTATNGTVTPQTVSLD 273
                S  G +G  M+F+  G L S  N   +    L     P++   NG    QT+S  
Sbjct: 237 GGDAASPTGHVGHTMRFNNDGTLSSLNNGQPIVTEPLGGGANPVDL--NGADVNQTLSFS 294

Query: 274 FTGSIQQSTGSDSIGSQTQDGYAAGQMTGYTINDDGTISGTYSNNKTQLLGQIVLSNFSN 333
              + Q +   + +    QDG   G +T    +++G++  TYSN     LG++ L   +N
Sbjct: 295 LDSATQFAAPFE-LTKFDQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVRVAN 353

Query: 334 PEGLKSEGDNVWTATASSGQAVTGIAGQGGLASMTSGALESSNVDLSAELVNMIVAQRNY 393
            +GL  +G   W AT  SG  + G + +G   S+++G+LE SN+D++ ELV++I AQRN+
Sbjct: 354 EQGLDKKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNF 413

Query: 394 QSNAQTIKTQDSILNTLVNLR 414
           Q+N++ ++  + +   ++ +R
Sbjct: 414 QANSRALEVHNGLQQNILQIR 434