Pairwise Alignments

Query, 414 a.a., flagellar hook protein FlgE from Rahnella sp. WP5

Subject, 460 a.a., flagellar hook protein FlgE (RefSeq) from Rhodospirillum rubrum S1H

 Score =  175 bits (444), Expect = 2e-48
 Identities = 140/463 (30%), Positives = 215/463 (46%), Gaps = 60/463 (12%)

Query: 2   SFSQAVSGLSAASTNLDVIGNNIANSATVGFKTATASFADMFAGSQ-----TGMGVKVAA 56
           S + AVS ++A S+++  I NN+ANS+T+G+KT+ ASF  +  G+      TG GV VA+
Sbjct: 7   SLNVAVSAMNAQSSSVSAISNNLANSSTIGYKTSNASFYSLVTGTGSTSNFTGAGV-VAS 65

Query: 57  VTQN-FNDGTTTNTSRGLDVALSGNGFFRLTDTSGA--VYYSRNGQFSLDANRNLVNMQG 113
            TQN  N G    T    D+A+ G G F +TD SG+  +YY+R G F  +A+ +LVN   
Sbjct: 66  ATQNVINQGVIVGTQNVTDLAVDGKGMFIVTDRSGSNELYYTRAGDFYPNADGDLVNSNN 125

Query: 114 LSVTGFPA--TGTPPTIA--AGAQPVALNIPTTLMNAKATTVGTMVANLNST-----DTA 164
             + G+P    G P T    +GA    +N+      AKAT+  ++ A L +       TA
Sbjct: 126 YYLQGYPTDRNGVPLTNTGNSGASLETINLAGATGAAKATSEMSIQAVLPAQATAGDSTA 185

Query: 165 IPAAKTFSSSDDTSYNYVNSITTYDSQGNAHDNNVYFVKTSANNWDVYAQDGSVTGSTAG 224
           +P    ++SS D        +  YDS G AH   V + K S   W +   D  ++    G
Sbjct: 186 VPPVAAYTSSSD--------VEIYDSLGVAHTMTVKWTKMSDTKWTMTLYDPKLSSDMTG 237

Query: 225 KI-GAMQFDTSGALVSTTNAAGVANA-GLALTLPMNTATNGTVTPQTVSLDFTGSIQQST 282
              GA+   T+G      NA   A + G+A+ +   T      TP  ++L  T      T
Sbjct: 238 DATGAISSTTTGVTDVPANAGPPATSHGIAVDVEF-TDQGLLKTPSVLALKITPDASNGT 296

Query: 283 GS------------------------DSIGSQT-------QDGYAAGQMTGYTINDDGTI 311
           G+                        DS G          QDG   G     TI+  G +
Sbjct: 297 GAAISEIALNLGTAGKANGLSTYSNEDSDGKPAVDLKKVVQDGVTYGTYYSNTISKAGLV 356

Query: 312 SGTYSNNKTQLLGQIVLSNFSNPEGLKSEGDNVWTATASSGQAVTGIAGQGGLASMTSGA 371
              ++N  +  + Q+ L+ FSN  GL++     ++AT  SG      AG GG   ++SG+
Sbjct: 357 YANFTNGISYPIYQVPLAMFSNVNGLEAVSGTAYSATVKSGTPTYVTAGTGGSGGVSSGS 416

Query: 372 LESSNVDLSAELVNMIVAQRNYQSNAQTIKTQDSILNTLVNLR 414
           +ESS VD +AE   +IV+Q+ Y +  Q I +   +   L++ +
Sbjct: 417 VESSTVDTAAEFSKLIVSQQAYSAATQIISSNQEMFQNLISAK 459