Pairwise Alignments

Query, 414 a.a., flagellar hook protein FlgE from Rahnella sp. WP5

Subject, 453 a.a., flagellar hook protein FlgE (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  223 bits (569), Expect = 7e-63
 Identities = 154/465 (33%), Positives = 229/465 (49%), Gaps = 63/465 (13%)

Query: 1   MSFSQAVSGLSAASTNLDVIGNNIANSATVGFKTATASFADMFAGS-------QTGMGVK 53
           MSF+ A+SG+SAA  +L+   NNIAN+ T+GFK + A FAD++A S         G GV 
Sbjct: 1   MSFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNSKTAVGGGVA 60

Query: 54  VAAVTQNFNDGTTTNTSRGLDVALSGNGFFRLTDTSGAV--YYSRNGQFSLDANRNLVNM 111
            + V Q F+ G+   T+  LD+A+ G GFF      G +   ++R G F +D N  +V+ 
Sbjct: 61  TSQVAQQFHQGSLQLTNNSLDLAIKGGGFFVTASEIGTLDHQFTRAGAFKVDKNNYMVDS 120

Query: 112 QGLSVTGFPAT--GTPPTIA-AGAQPVALNIPTTLMNAKATTVGTMVANLNSTDTAIPAA 168
            G  +  FP    G   +++   A+PV   IP T  +   T   T+  NLN+ + ++  A
Sbjct: 121 AGNFLQTFPVDKDGNSTSVSLTTAKPV--QIPDTAGSPVQTENVTLQMNLNAKEGSLDPA 178

Query: 169 KTFSSSDDTSYNYVNSITTYDSQGNAHDNNVYFVKTS------ANNWDVYAQDGSVTGST 222
             F   D  +YN V S+T YDS G  H    YFVK +       NNW  Y          
Sbjct: 179 -AFDPLDSKTYNSVTSMTIYDSLGEPHIMTTYFVKPNNGSYNGENNWVAYYAIDGKQVDV 237

Query: 223 AGKIGAMQFDTSG---------------------------------ALVSTTNAAGVANA 249
           +G  G  Q DT+G                                   V TT A GV  A
Sbjct: 238 SGPAGTYQTDTNGDGTPDATGTAQTTGGWKGSVLKFNSVGVYTGSDPAVVTTEALGVGGA 297

Query: 250 GLALTLPMNTATNGTVTPQTVSLDFTGSIQQSTGSDSIGSQTQDGYAAGQMTGYTINDDG 309
           G+     +    +GT   Q V++ F    Q S    +    +QDG   G++T   I +DG
Sbjct: 298 GV-----LGPGADGT---QAVNIKFNAPTQYSAPFAAT-ELSQDGTTVGRLTNVEIGEDG 348

Query: 310 TISGTYSNNKTQLLGQIVLSNFSNPEGLKSEGDNVWTATASSGQAVTGIAGQGGLASMTS 369
            I+ +YSN  T  L ++ L  F+N +GL   G+  W A+ SSG A+ G    G   S++S
Sbjct: 349 LITASYSNGSTVPLARVALVRFANEQGLTQVGNTSWKASLSSGPALAGEPNSGTFGSLSS 408

Query: 370 GALESSNVDLSAELVNMIVAQRNYQSNAQTIKTQDSILNTLVNLR 414
            ALE SN+DL+ ELV++I AQRN+Q+N++T++  +++  T++ +R
Sbjct: 409 SALEQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQIR 453