Pairwise Alignments

Query, 526 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

Subject, 504 a.a., peptide ABC transporter from Sinorhizobium meliloti 1021

 Score =  180 bits (456), Expect = 1e-49
 Identities = 146/508 (28%), Positives = 232/508 (45%), Gaps = 18/508 (3%)

Query: 8   TFRKNTKTQVAGAIFLALSGLSFATQAAVPKDMLVIGKAADPQTLDPAVTIDNNDWTVTY 67
           T R N   + A A  L LS   +A  A +    L IG+  D  T DP  +  N D  V  
Sbjct: 2   TKRWNKIGRAAFAAALMLSA-GYAEAAGI----LSIGRREDSTTFDPIKSAQNVDNWVFS 56

Query: 68  PAYQRLVQYKTEDGKGSTQVEGDLAASWTASPDQLVWTFKLKPGAKFDDGSDVNADAVKW 127
             +  LV+      K  T++E  LA SWT S D L +TFK++  AKF DGS + A+   +
Sbjct: 57  NVFDVLVRVD----KTGTKLEPGLAESWTLSDDGLTYTFKIRD-AKFSDGSPITAEDAAF 111

Query: 128 SFERLMKI-GQGPSEAFPKDMTVTVVDPMTVTFTLKTPFAPFLYTLANDGAGIVNPAIAK 186
           S  R+    G   S+++    T    DP T+   LKTP APFL TLA     +++    +
Sbjct: 112 SLLRIRDHEGSLWSDSYKIIETAEAADPKTLVVKLKTPSAPFLSTLALPNVSVLSKKAVE 171

Query: 187 ANPADEGKAWLAGHTAGSGPYKLDRWQKGQQLVLVPNPHY-SGTKPAFKRVTVKIIGESA 245
           A       A+    TA SG + +  W++G +++L  NP++    +     V    + +  
Sbjct: 172 AGE----DAFAELPTASSGAFTVKEWRRGDRVILEKNPNFWQADRVKLDGVEWISVPDDN 227

Query: 246 TRRLQLSRGDLDIADSLPMDQLAALKKENKVAVEEFPSLRVTYLYLNNGKTPLNQVDLRR 305
           TR L +  G LD A  +P  ++  LKK+  + V    S R  +L +N+    L + ++R+
Sbjct: 228 TRMLNVQAGQLDTAIFVPFSRVEELKKDPNLTVHIDTSTREDHLLINHEHGMLAKKEVRQ 287

Query: 306 AISSAVDYQGMVKGILGGNAKQMRGPIPDGMWGFDPTAKQYTLDLTQAKADLEKVKDKPQ 365
           A+  A+D + +V  +  G        IP G         QY  D  +AKA L +      
Sbjct: 288 ALDMAIDKKAIVDTVTFGIGTVANSYIPKGSLYHYDANYQYPYDPEKAKAMLAEAGASDL 347

Query: 366 TLDFLYSDNDPNWESIALSVQASLGQAGINVKLEKLANATMRDRIGQGDYDISIGNWSPD 425
           TL+++ +  +   E IA+ +Q    +AG+ V L+K+  +   D +  GDYDIS+  W+ D
Sbjct: 348 TLNYVVNAGNEVDEQIAVLLQQQFAKAGVTVNLQKVDASQSWDMLVAGDYDISVMYWTND 407

Query: 426 FADPYMFMNYWFESDKKGLPGNRSFYSNPDVDALLKKAVSVTDQKQRTDYYQQAQKIVID 485
             DP     +    D        + Y++  V  L+  A    D  +R   Y   QK   D
Sbjct: 408 VLDPDQKTTFVLGHDTN--MNYMTRYNSEKVKELVAAARLELDPAKREAMYVDIQKTAKD 465

Query: 486 EAAYVYLFQKNYQVAMNKDVKGFVFNPM 513
           +  ++ L+   Y     K+++ F  NP+
Sbjct: 466 DVHWIDLYYSPYLNVSRKNIENFYQNPL 493