Pairwise Alignments

Query, 526 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  230 bits (587), Expect = 8e-65
 Identities = 164/512 (32%), Positives = 251/512 (49%), Gaps = 33/512 (6%)

Query: 23  LALSGLSFATQAAVPK------DMLVIGKAADPQTLDPAVTIDNNDWTVTYPAYQRLVQY 76
           +AL+ L+FA  AA P       D+LV+G+ A+PQ+LDP      ND+ +    Y  LV++
Sbjct: 9   IALAALAFAGAAAAPAAAQTPPDVLVVGQIAEPQSLDPHTVTATNDFRILVNVYDGLVRF 68

Query: 77  KTEDGKGSTQVEGDLAASWTASPDQLVWTFKLKPGAKFDDGSDVNADAVKWSFERLMK-- 134
           K     G+ +VE  LA SW  S D   +TF L+ G KF DGS+ +A+AVK++F+R++K  
Sbjct: 69  KD----GTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLKKD 124

Query: 135 ---IGQGP---SEAFPKDMTVTVVDPMTVTFTLKTPFAPFLYTLANDGAGIVNPAIAKAN 188
                 GP   S  F     V V+D  TV F L   FAPFL  LA     IV+P   + +
Sbjct: 125 HPFYDTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVAVEKH 184

Query: 189 PADEGKAWLAGHTAGSGPYKLDRWQKGQQLVLVPNPHYSGTKPAFKRVTVKIIGESATRR 248
             + G++      +G+GP+K   W   Q++V+  NP Y  +    + V  + I ++ TR 
Sbjct: 185 GKEYGRS-----PSGTGPFKFVEWLSNQRVVVERNPDYWDSAAKLQAVVFRPITDANTRV 239

Query: 249 LQLSRGDLDIADSLPMDQLAALKKENKVAVEEFPSLRVTYLYLNNGKTPLNQVDLRRAIS 308
            ++  G +D+   +P D LA  +++   AV E     V +  LN  + P     +R+A +
Sbjct: 240 AEMMAGGIDVMVEVPPDNLATFEQDANFAVAEQAGPHVWFTILNTKQGPFADKRVRQAAN 299

Query: 309 SAVDYQGMVKGILGGNAKQMRGPIPDGMWGFDPTAKQYTLDLTQAKADL-EKVKDKPQTL 367
            AV+ Q +V  +L G A    GPIP      + + + Y  D  +AKA L E   + PQ  
Sbjct: 300 YAVNKQTLVDDVLRGTATVAAGPIPPAFNWVESSVEPYAHDPEKAKALLAEAGVENPQVT 359

Query: 368 DFLYSDNDPNWESIAL--SVQASLGQAGINVKLEKLANATMRDRIG---QGDYDISIGNW 422
            ++        + I +  ++QA L   G  VK+E     T   R+    +G  D++   W
Sbjct: 360 FYVTEGGSGMLDPITMGAAIQADLQAVGFKVKIETYEWNTFLGRVNPGLEGKADMAEMAW 419

Query: 423 SPDFAD--PYMFMNYWFESDKKGLPGNRSFYSNPDVDALLKKAVSVTDQKQRTDYYQQAQ 480
             +  D  PY+ +      DK G   N  +YSNP +D LL+KA   TDQ +R   Y + Q
Sbjct: 420 MTNDPDTVPYLTLRTDAMPDKGGF--NSGYYSNPQLDELLEKARRSTDQAERGKLYGEVQ 477

Query: 481 KIVIDEAAYVYLFQKNYQVAMNKDVKGFVFNP 512
            IV D+A ++++            VKGF   P
Sbjct: 478 SIVHDDAPWLFVANWKQNAVTTAAVKGFKLQP 509