Pairwise Alignments

Query, 338 a.a., autoinducer 2 ABC transporter substrate-binding protein LsrB from Rahnella sp. WP5

Subject, 319 a.a., sugar ABC transporter substrate-binding protein from Ralstonia solanacearum IBSBF1503

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 12/242 (4%)

Query: 11  IASAVSLACLSAQAAER---IAFIPKLVGVGYFTSGGNGAMAAGKALGADVTYDGP---T 64
           +A A+ +   +A+AA R   IA + K +   +F +  NGA A  KA  ++ T        
Sbjct: 17  LALALPVPFAAARAANRPPKIALVMKSLANEFFLTMENGARAHQKAHASEYTLLANGIRD 76

Query: 65  EPSVSGQVQMINNFVNQGYNAIVVAAVSPDGLCPALKRAMQRGVKVLTWDSDTKPEC-RS 123
           E    GQ+++I   +    +A+V+A      L P +K+A+  G  V+  D+   PE  + 
Sbjct: 77  ETDTGGQIRLIEQMIVARVDALVLAPADSKALVPVVKKAVDAGTLVVNIDNRLDPEALKE 136

Query: 124 IYIN---QGTPQQLGSMLVEMTSSQVKKEKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH 180
             +N    G   + G+ LV    ++  K    +      PT T+  Q  + A  + A   
Sbjct: 137 KGLNVPFVGPDNRKGARLVGDYVARSLKPGDAIGIIEGIPTTTNAQQ--RTAGFREAATA 194

Query: 181 PGWEIVTTQYGYNDATKSLQTAEGILKSYGDLDAIIAPDANALPAAAQAAENLKRTNVTI 240
               IV+ Q G  +  K  + A  +L++  D+ A++  + N    A  A     +T   +
Sbjct: 195 AKLRIVSVQSGEWEIDKGNKVAAAMLRAQPDIKALLCGNDNMAIGAVSAVRAAGKTGRVL 254

Query: 241 VG 242
           +G
Sbjct: 255 IG 256