Pairwise Alignments

Query, 403 a.a., D-alanyl-D-alanine carboxypeptidase from Rahnella sp. WP5

Subject, 390 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) from Shewanella loihica PV-4

 Score =  375 bits (962), Expect = e-108
 Identities = 189/374 (50%), Positives = 271/374 (72%), Gaps = 9/374 (2%)

Query: 19  VLLLALPAAQADNAPV----APQINAKSWVLMDYNSGKILTESNPDARLDPASLSKIMVS 74
           +L+ +L    A+ APV    AP++ AK+++LMDYNSG+I+ E N    L+PASL+K+M S
Sbjct: 12  LLVSSLSITAANAAPVVTPDAPKVAAKAFILMDYNSGQIIAEENAYESLNPASLTKMMTS 71

Query: 75  YVVGQAIKSGKIKSDDLVSVGNDAWATGNPVLRGSSLMFLKPGDRVPVSELNKGIVIQSG 134
           YV+G  IK G I   D V++  +AW+   P    SS MF++ G +V V ELN+GI+IQSG
Sbjct: 72  YVIGHEIKVGNISPQDKVTISKNAWSKNFP---DSSKMFIEVGKQVSVEELNRGIIIQSG 128

Query: 135 NDASIALADFVAGSQDSFVNLMNRYAEQLKLQNTHFKTVHGLDADGQYTSATDMALLSQA 194
           NDA +A+A+ +AG++D FV+LMN +A+QL +++++F+  HGLD++   T+A DMALL  A
Sbjct: 129 NDACVAMAEHIAGTEDGFVDLMNSWAKQLGMRDSYFENSHGLDSENHKTTAYDMALLGAA 188

Query: 195 LIRDTPDEYALHKEKEFTFNHIKQINRNRLLWSSNLNVDGIKTGYTSGAGYNLVSSASDS 254
           LIRD P+EY ++ EK FT+N IKQ NRN LLW  +LNVDGIKTG+TSGAGYNLV+SA+  
Sbjct: 189 LIRDVPEEYRVYSEKSFTYNGIKQYNRNGLLWDKSLNVDGIKTGHTSGAGYNLVTSAT-K 247

Query: 255 TGMRLIAVVMGAPSDRIRFNESESLLTWGFRFYETLTPIKAGDAFTSQRVWFGEEKMVPL 314
            GMRL++VV+G  S+  R  ES+ LL +GFRF+ET+TP KAGD+F +Q++W+G+ + V L
Sbjct: 248 DGMRLVSVVLGTASESARKAESKKLLNYGFRFFETITPYKAGDSFVTQKIWYGDRESVDL 307

Query: 315 GVAENASLTMPKGQLKNLKASFNLTSPQLEAPLAKNQVVGTVDFSLDGKVIEQRPLVALQ 374
           GV  +  +T+ +GQ KNL+A++ L + +L AP+AK + VG + F L+GK I Q PLV LQ
Sbjct: 308 GVLTDTPITISRGQAKNLEANYEL-NKELTAPIAKGETVGRIYFQLNGKDIAQFPLVTLQ 366

Query: 375 EVKETGFIGRIWDF 388
           EV E  +  ++ D+
Sbjct: 367 EVNEGSWFSKLMDY 380