Pairwise Alignments

Query, 403 a.a., D-alanyl-D-alanine carboxypeptidase from Rahnella sp. WP5

Subject, 390 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  380 bits (975), Expect = e-110
 Identities = 193/374 (51%), Positives = 272/374 (72%), Gaps = 5/374 (1%)

Query: 22  LALPAAQADNAPVAPQINAKSWVLMDYNSGKILTESNPDARLDPASLSKIMVSYVVGQAI 81
           L + AAQ    P AP + AK++VLMDY SG+I+ E N    L+PASL+K+M SYV+GQ I
Sbjct: 19  LPVYAAQPIVTPDAPTVAAKAYVLMDYYSGQIIAEENAYESLNPASLTKMMTSYVIGQEI 78

Query: 82  KSGKIKSDDLVSVGNDAWATGNPVLRGSSLMFLKPGDRVPVSELNKGIVIQSGNDASIAL 141
           K+G +  DD V++  +AW+        SS MF++ G  V VS+LN+GI+IQSGNDA +A+
Sbjct: 79  KAGNVSPDDDVTISKNAWSKN---FSDSSKMFIEVGKTVKVSDLNRGIIIQSGNDACVAM 135

Query: 142 ADFVAGSQDSFVNLMNRYAEQLKLQNTHFKTVHGLDADGQYTSATDMALLSQALIRDTPD 201
           A+ +AG++ +FV++MN +++QL +++++F+  HGLD++   T+A DMALL  ALIRD P+
Sbjct: 136 AEHIAGTEGAFVDMMNSWSKQLGMRDSYFENSHGLDSENHKTTAYDMALLGAALIRDVPE 195

Query: 202 EYALHKEKEFTFNHIKQINRNRLLWSSNLNVDGIKTGYTSGAGYNLVSSASDSTGMRLIA 261
           EY ++ EK +TFN IKQ NRN LLW +++NVDGIKTG+TSGAGYNLV+SA+   GMRLI+
Sbjct: 196 EYRIYSEKYYTFNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASAT-KDGMRLIS 254

Query: 262 VVMGAPSDRIRFNESESLLTWGFRFYETLTPIKAGDAFTSQRVWFGEEKMVPLGVAENAS 321
           VVMG  S+  R  ES+ LLT+GFRF+ET+TP KAGD+F +Q++W+G++  V LGVA +  
Sbjct: 255 VVMGTQSEAARKAESKKLLTYGFRFFETVTPYKAGDSFVTQQIWYGDKSTVDLGVATDTP 314

Query: 322 LTMPKGQLKNLKASFNLTSPQLEAPLAKNQVVGTVDFSLDGKVIEQRPLVALQEVKETGF 381
           +T+ +G+ K+LKA+F LT P L+APL K + VG + F LDGK I Q PLV LQEV E  +
Sbjct: 315 ITVSRGRAKDLKANFELTKP-LDAPLKKGETVGRLYFQLDGKDIAQFPLVTLQEVNEGSW 373

Query: 382 IGRIWDFVMMKISG 395
             ++ D+     SG
Sbjct: 374 FSKLVDYFKQLFSG 387